Short Retroposons in Eukaryotic Genomes

Initial sequencing and analysis of the human genome

2001 • 23,520 citations

Initial sequencing and comparative analysis of the mouse genome

2002 • 6,971 citations

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

2004 • 2,149 citations

Selfish DNA: the ultimate parasite

1980 • 2,095 citations

The Genome Sequence of the Malaria Mosquito Anopheles gambiae

2002 • 1,980 citations

Cytosine methylation and the ecology of intragenomic parasites

1997 • 1,906 citations

Selfish genes, the phenotype paradigm and genome evolution

1980 • 1,779 citations

Alu repeats and human genomic diversity

2002 • 1,436 citations

DNA methylation and the frequency of CpG in animal DNA

1980 • 1,146 citations

Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition

1993 • 1,129 citations

Human L1 Retrotransposon Encodes a Conserved Endonuclease Required for Retrotransposition

1996 • 1,093 citations

NONVIRAL RETROPOSONS: GENES, PSEUDOGENES, AND TRANSPOSABLE ELEMENTS GENERATED BY THE REVERSE FLOW OF GENETIC INFORMATION

1986 • 1,032 citations

Repbase Update: a database and an electronic journal of repetitive elements

2000 • 983 citations

LINE-mediated retrotransposition of marked Alu sequences

2003 • 965 citations

Interspersed repeats and other mementos of transposable elements in mammalian genomes

1999 • 959 citations

Alu Repeats and Human Disease

1999 • 898 citations

Signal Sequence Recognition and Protein Targeting to the Endoplasmic Reticulum Membrane

1994 • 821 citations

Human LINE retrotransposons generate processed pseudogenes

2000 • 807 citations

Biology of Mammalian L1 Retrotransposons

2001 • 751 citations

Human L1 Retrotransposition: cisPreference versus trans Complementation

2001 • 617 citations

Base sequence studies of 300 nucleotide renatured repeated human DNA clones

1981 • 605 citations

Recruitment of RNA polymerase III to its target promoters

2002 • 600 citations

Alu sequences are processed 7SL RNA genes

1984 • 592 citations

The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution

2004 • 583 citations

Regulation of Gene Expression: Possible Role of Repetitive Sequences

1979 • 575 citations

Ubiquitous, interspersed repeated sequences in mammalian genomes.

1980 • 568 citations

The Origin and Evolution of Retroposons

1985 • 555 citations

The age and evolution of non-LTR retrotransposable elements

1999 • 546 citations

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

1997 • 546 citations

SURVEY AND SUMMARY Transcription by RNA polymerases I and III

2000 • 491 citations

Human L1 element target-primed reverse transcription in vitro

2002 • 491 citations

An Alu Transposition Model for the Origin and Expansion of Human Segmental Duplications

2003 • 432 citations

Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: Hippopotamuses are the closest extant relatives of whales

1999 • 424 citations

An Alu Element in the Myeloperoxidase Promoter Contains a Composite SP1-Thyroid Hormone-Retinoic Acid Response Element

1996 • 415 citations

The La Protein

2002 • 410 citations

Molecular evidence from retroposons that whales form a clade within even-toed ungulates

1997 • 401 citations

SINE insertions: powerful tools for molecular systematics

2000 • 383 citations

DNA methylation and imprinting: why bother?

1997 • 370 citations

Cloning of decay-accelerating factor suggests novel use of splicing to generate two proteins

1987 • 359 citations

A cap-binding protein complex mediating U snRNA export

1995 • 347 citations

Short interspersed repetitive DNA elements in eucaryotes: Transposable DNA elements generated by reverse transcription of RNA pol III transcripts?

1981 • 339 citations

African origin of human-specific polymorphic Alu insertions.

1994 • 335 citations

The nucleotide sequence of the ubiquitous repetitive DNA sequence B1 complementary to the most abundant class of mouse fold-back RNA

1980 • 326 citations

Proofreading and Aminoacylation of tRNAs Before Export from the Nucleus

1998 • 316 citations

LINEs Mobilize SINEs in the Eel through a Shared 3′ Sequence

2002 • 312 citations

Nuclear Export of 60S Ribosomal Subunits Depends on Xpo1p and Requires a Nuclear Export Sequence-Containing Factor, Nmd3p, That Associates with the Large Subunit Protein Rpl10p

2001 • 310 citations

Ubiquitous transposon-like repeats B1 and B2 of the mouse genome: B2 sequencing

1982 • 302 citations

3′-End processing of pre-mRNA in eukaryotes

1999 • 301 citations

Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts

1995 • 301 citations

Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: substitutions, frameshifts, and hypermutations.

1990 • 282 citations

A chromatin remodelling complex that loads cohesin onto human chromosomes

2002 • 282 citations

The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock

2004 • 277 citations

Alu sequences in the coding regions of mRNA: a source of protein variability

1994 • 276 citations

Primate jumping genes elucidate strepsirrhine phylogeny

2004 • 262 citations

Transduction of 3'-flanking sequences is common in L1 retrotransposition

2000 • 259 citations

SINEs and LINEs share common 3′ sequences: a review

1997 • 259 citations

Repeat sequence families derived from mammalian tRNA genes

1985 • 242 citations

Twin Priming: A Proposed Mechanism for the Creation of Inversions in L1 Retrotransposition

2001 • 238 citations

Developmental and cell type specificity of LINE-1 expression in mouse testis: implications for transposition.

1994 • 238 citations

DNA methylation: evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotes

1990 • 227 citations

Identification of a New Subclass of Alu DNA Repeats Which Can Function as Estrogen Receptor-dependent Transcriptional Enhancers

1995 • 226 citations

MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation

1995 • 226 citations

On the structural organization of operon and the regulation of RNA synthesis in animal cells

1969 • 216 citations

Dendritic BC1 RNA: Functional Role in Regulation of Translation Initiation

2002 • 213 citations

Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms

2003 • 213 citations

RNA Template Requirements for Target DNA-Primed Reverse Transcription by the R2 Retrotransposable Element

1995 • 212 citations

Determination of the phylogenetic relationships among Pacific salmonids by using short interspersed elements (SINEs) as temporal landmarks of evolution.

1993 • 201 citations

Nuclear RNA export

2003 • 197 citations

GENERATION OF DIVERSITY IN RETROVIRUSES

1990 • 197 citations

Structure and variability of recently inserted Alu family members

1990 • 196 citations

A mouse model of human L1 retrotransposition

2002 • 194 citations

Potential Alu Function: Regulation of the Activity of Double-Stranded RNA-Activated Kinase PKR

1998 • 189 citations

Structure and assembly of the Alu domain of the mammalian signal recognition particle

2000 • 189 citations

Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates

2003 • 186 citations

Gamma-monomethyl phosphate: a cap structure in spliceosomal U6 small nuclear RNA.

1989 • 185 citations

Complete Genomic Sequence and Analysis of the Prion Protein Gene Region from Three Mammalian Species

1998 • 183 citations

The 3′ Ends of tRNA-Derived Short Interspersed Repetitive Elements Are Derived from the 3′ Ends of Long Interspersed Repetitive Elements

1996 • 178 citations

Common 82-nucleotide sequence unique to brain RNA.

1982 • 177 citations

The consensus sequence of a major Alu subfamily contains a functional retinoic acid response element.

1995 • 176 citations

DNA methylation in the Alu sequences of diploid and haploid primary human cells.

1993 • 175 citations

Sequence conservation in Alu evolution

1989 • 172 citations

Schistosome Satellite DNA Encodes Active Hammerhead Ribozymes

1998 • 171 citations

SINEs and LINEs: the art of biting the hand that feeds you

2002 • 171 citations

The impact of short interspersed elements (SINEs) on the host genome

1995 • 168 citations

Minimal Conditions for Exonization of Intronic Sequences

2004 • 163 citations

Transcriptional regulation and transpositional selection of active SINE sequences

1992 • 162 citations

Alu transcripts: cytoplasmic localisation and regulation by DNA methylation

1994 • 162 citations

The Chinese hamster Alu-equivalent sequence: a conserved highly repetitious, interspersed deoxyribonucleic acid sequence in mammals has a structure suggestive of a transposable element.

1981 • 157 citations

Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

1999 • 156 citations

Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome

2001 • 156 citations

Active Alu Element “A-Tails”: Size Does Matter

2002 • 151 citations

mRNA degradation machines in eukaryotic cells

2002 • 150 citations

Poly(A)-binding Protein is Associated with Neuronal BC1 and BC200 Ribonucleoprotein Particles

2002 • 148 citations

Physiological stresses increase mouse short interspersed element (SINE) RNA expression in vivo

1999 • 147 citations

Transcripts regulated during normal embryonic development and oncogenic transformation share a repetitive element

1983 • 146 citations

Identifier sequences are transcribed specifically in brain

1984 • 146 citations

Role of a neuronal small non-messenger RNA: behavioural alterations in BC1 RNA-deleted mice

2004 • 143 citations

SINEs of the perfect character

1999 • 143 citations

Mechanisms of Retroviral Recombination

2001 • 143 citations

Molecular paleontology of transposable elements from Arabidopsis thaliana

2000 • 142 citations

Identification and characterization of an Alu-containing, T-cell-specific enhancer located in the last intron of the human CD8 alpha gene.

1993 • 141 citations

The Human Growth Hormone Gene Locus: Structure, Evolution, and Allelic Variations

1987 • 140 citations

Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.

1981 • 139 citations

Expression of enhanced levels of small RNA polymerase III transcripts encoded by the B2 repeats in simian virus 40-transformed mouse cells

1985 • 139 citations

Structural organization of glycophorin A and B genes: glycophorin B gene evolved by homologous recombination at Alu repeat sequences.

1989 • 134 citations

Transcriptional activation of short interspersed elements by DNA-damaging agents

2000 • 132 citations

Induction of B2 RNA polymerase III transcription by heat shock: enrichment for heat shock induced sequences in rodent cells by hybridization subtraction

1986 • 131 citations

Developmental differences in methylation of human Alu repeats.

1993 • 129 citations

A Novel Class of SINE Elements Derived from 5S rRNA

2003 • 129 citations

CORE-SINEs: Eukaryotic short interspersed retroposing elements with common sequence motifs

1999 • 126 citations

Transcriptional analysis of interspersed repetitive polymerase III transcription units in human DNA

1981 • 125 citations

Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution.

1991 • 125 citations

Short interspersed nuclear element (SINE) sequences of the Bovidae

1993 • 124 citations

Analysis of transcription of the human Alu family ubiquitous repeating element by eukaryotic RNA polymerase III

1981 • 122 citations

Brain-specific genes have identifier sequences in their introns.

1984 • 120 citations

A novel family of short interspersed repetitive elements (SINEs) from cichlids: the patterns of insertion of SINEs at orthologous loci support the proposed monophyly of four major groups of cichlid fishes in Lake Tanganyika

1998 • 119 citations

Negative regulation of the human epsilon-globin gene by transcriptional interference: role of an Alu repetitive element.

1990 • 112 citations

Similar integration but different stability of Alus and LINEs in the human genome

2001 • 112 citations

Long double-stranded sequences (dsRNA-B) of nuclear pre-mRNA consist of a few highly abundant classes of sequences: evidence from DNA cloning experiments

1979 • 112 citations

Nucleosome interactions with a human Alu element. Transcriptional repression and effects of template methylation.

1993 • 112 citations

Transposable B2 SINE elements can provide mobile RNA polymerase II promoters

2001 • 110 citations

Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73-bp repeat may have evolved from tRNA genes

1985 • 109 citations

Functional analysis of the human adenosine deaminase gene thymic regulatory region and its ability to generate position-independent transgene expression.

1992 • 108 citations

p53 Inhibits RNA Polymerase III-Directed Transcription in a Promoter-Dependent Manner

1996 • 108 citations

Alu repeated DNAs are differentially methylated in primate germ cells

1994 • 107 citations

Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs.

1993 • 105 citations

V-SINEs: A New Superfamily of Vertebrate SINEs That Are Widespread in Vertebrate Genomes and Retain a Strongly Conserved Segment within Each Repetitive Unit

2002 • 105 citations

A New Family of Chimeric Retrotranscripts Formed by a Full Copy of U6 Small Nuclear RNA Fused to the 3′ Terminus of L1

2002 • 103 citations

RECOGNITION AND SILENCING OF REPEATED DNA

2000 • 99 citations

Non-traditional Alu evolution and primate genomic diversity

2002 • 98 citations

A highly reiterated family of transcribed oligo(A)-terminated, interspersed DNA elements in the genome of Bombyx mori

1986 • 97 citations

The origins and implications of Aluternative splicing

2003 • 94 citations

Activation of RNA polymerase III transcription of human Alu repetitive elements by adenovirus type 5: requirement for the E1b 58-kilodalton protein and the products of E4 open reading frames 3 and 6.

1993 • 93 citations

The 3′ ends of tRNA-derived SINEs originated from the 3’ ends of LINEs: A new example from the bovine genome

1997 • 93 citations

Patterns of mRNA prevalence and expression of B1 and B2 transcripts in early mouse embryos

1987 • 92 citations

Molecular evolution of intergenic DNA in higher primates: pattern of DNA changes, molecular clock, and evolution of repetitive sequences.

1988 • 91 citations

Genealogy of families of SINEs in cetaceans and artiodactyls: the presence of a huge superfamily of tRNA(Glu)-derived families of SINEs

1999 • 91 citations

Tandem B1 Elements Located in a Mouse Methylation Center Provide a Target for de Novo DNA Methylation

1999 • 91 citations

Distinctive sequence organization and functional programming of an Alu repeat promoter.

1984 • 90 citations

Secondary structure model of the RNA recognized by the reverse transcriptase from the R2 retrotransposable element.

1997 • 89 citations

Evolutionary inventions and continuity of CORE-SINEs in mammals

2000 • 88 citations

Patterns of Insertions and Their Covariation With Substitutions in the Rat, Mouse, and Human Genomes

2004 • 88 citations

Retropositional parasitism of SINEs on LINEs: identification of SINEs and LINEs in elasmobranchs

1999 • 87 citations

SINE retroposons can be used in vivo as nucleation centers for de novo methylation.

2000 • 86 citations

Ancient SINEs from African Endemic Mammals

2003 • 81 citations

Involvement of Alu sequences in the cell-specific regulation of transcription of the gamma chain of Fc and T cell receptors.

1993 • 81 citations

Upstream flanking sequences and transcription of SINEs 1 1Edited by M. Gottesman

2000 • 81 citations

Repetitive sequence involvement in the duplication and divergence of mouse lysozyme genes.

1990 • 79 citations

Multiple dispersed loci produce small cytoplasmic Alu RNA.

1993 • 79 citations

Transcription, processing and nuclear transport of a B1 Alu RNA species complementary to an intron of the murine α-fetoprotein gene

1985 • 78 citations

An analysis of retroposition in plants based on a family of SINEs from Brassica napus

1994 • 77 citations

Neuronal BC1 RNA structure: Evolutionary conversion of a tRNAAla domain into an extended stem-loop structure

2001 • 77 citations

Transposable elements as the key to a 21st century view of evolution

2000 • 77 citations

Sequences Attaching Loops of Nuclear and Mitochondrial DNA to Underlying Structures in Human Cells: The Role of Transcription Units

1996 • 76 citations

The sequences homologous to major interspersed repeats B1 and B2 of mouse genome are present in mRNA and small cytoplasmic poty(A)⁺RNA

1982 • 76 citations

Total DNA transcription in vitro: a procedure to detect highly repetitive and transcribable sequences with tRNA-like structures.

1986 • 76 citations

An Alu Element from the K18 Gene Confers Position-independent Expression in Transgenic Mice

2000 • 75 citations

Short Retroposons of the B2 Superfamily: Evolution and Application for the Study of Rodent Phylogeny

1998 • 74 citations

Selective stimulation of translational expression by Alu RNA

2002 • 74 citations

Characterization of Novel Alu- and tRNA-Related SINEs from the Tree Shrew and Evolutionary Implications of Their Origins

2002 • 74 citations

Analysis of repetitive sequence elements containing tRNA-like sequences

1985 • 74 citations

Phylogenetics of worldwide human populations as determined by polymorphic Alu insertions.

2002 • 73 citations

A second major class of Alu family repeated DNA sequences in a primate genome

1983 • 73 citations

Characterization of a plant SINE, p-SINE1, in rice genomes.

1992 • 73 citations

RNA polymerase III promoter and terminator elements affect Alu RNA expression

1995 • 72 citations

Several short interspersed repetitive elements (SINEs) in distant species may have originated from a common ancestral retrovirus: characterization of a squid SINE and a possible mechanism for generation of tRNA-derived retroposons.

1993 • 71 citations

Target DNA chromatinization modulates nicking by L1 endonuclease

2001 • 71 citations

Widespread Use of TATA Elements in the Core Promoters for RNA Polymerases III, II, and I in Fission Yeast

2001 • 71 citations

Functional Insertion of an Alu Type 2 (B2 SINE) Repetitive Sequence in Murine Class I Genes

1984 • 69 citations

Enhancement of reporter gene de novo methylation by DNA fragments from the alpha-fetoprotein control region.

1994 • 69 citations

Control of Genes by Mammalian Retroposons

1998 • 69 citations

Active Alu in Paternal Germlines>Active Alu Elements Are Passed Primarily through Paternal Germlines

2002 • 68 citations

BC1 RNA: Transcriptional Analysis of a Neural Cell-Specific RNA Polymerase III Transcript

1995 • 68 citations

DANA elements: a family of composite, tRNA-derived short interspersed DNA elements associated with mutational activities in zebrafish (Danio rerio).

1996 • 68 citations

Adenovirus Type 2 Preferentially Stimulates Polymerase III Transcription of Alu Elements by Relieving Repression: a Potential Role for Chromatin

1995 • 66 citations

Identification and DNA sequence of an interspersed repetitive DNA element in the genome of the miniature swine

1987 • 66 citations

Further Characterization of Thyroid Hormone Response Elements in the Human Type 1 Iodothyronine Deiodinase Gene¹

1998 • 65 citations

Association of some potential hormone response elements in human genes with the Alu family repeats

1999 • 64 citations

Newly arisen DNA repeats in primate phylogeny.

1989 • 64 citations

B1 and related SINEs in mammalian genomes

2003 • 62 citations

cDNAs derived from primary and small cytoplasmic Alu (scAlu) transcripts

1997 • 61 citations

Monomeric scAlu and nascent dimeric Alu RNAs induced by adenovirus are assembled into SRP9/14-containing RNPs in HeLa cells

1996 • 60 citations

HSV infection induces increased transcription of Alu repeated sequences by RNA polymerase III

1989 • 59 citations

Shared Protein Components of SINE RNPs

2002 • 58 citations

The Evolutionary Origin and Genomic Organization of SINEs in Arabidopsis thaliana

2001 • 58 citations

Wide distribution of short interspersed elements among eukaryotic genomes

1999 • 58 citations

RNAs containing B2 repeated sequences are transcribed in the early stages of mouse embryogenesis.

1985 • 58 citations

A retroposon-like short repetitive DNA element in the genome of the human blood fluke, Schistosoma mansoni

1989 • 57 citations

Short interspersed elements (SINEs) from insectivores. Two classes of mammalian SINEs distinguished by A-rich tail structure

2001 • 56 citations

Multiplicity of glutathione S-transferase genes in the rat and association with a type 2 Alu repetitive element

1986 • 55 citations

Mouse ubiquitous B2 repeat in polysomal and cytoplasmic poly(A)⁺RNAs: uniderectional orientation and 3′-end localization

1983 • 54 citations

Flanking sequences of an Alu source stimulate transcription in vitro by interacting with sequence-specific transcription factors

1996 • 53 citations

A Newly Isolated Family of Short Interspersed Repetitive Elements (SINEs) in Coregonid Fishes (Whitefish) With Sequences That Are Almost Identical To Those of the SmaI Family of Repeats: Possible Evidence for the Horizontal Transfer of SINEs

1997 • 52 citations

Repetitive Elements form a Cruciform Structure that Regulates the Function of the Human CD8α T Cell-specific En hancer

1995 • 52 citations

Human Signal Recognition Particle (SRP) Alu-associated Protein Also Binds Alu Interspersed Repeat Sequence RNAs

1995 • 52 citations

The rabbit C family of short, interspersed repeats

1984 • 52 citations

CAN—a pan-carnivore SINE family

2002 • 52 citations

Using SINEs to Probe Ancient Explosive Speciation: "Hidden" Radiation of African Cichlids?

2003 • 52 citations

Nuclear export of signal recognition particle RNA is a facilitated process that involves the Alu sequence domain

1994 • 51 citations

On the Roles of Repetitive DNA Elements in the Context of a Unified Genomic‐Epigenetic System

2002 • 51 citations

First Application of the SINE (Short Interspersed Repetitive Element) Method to Infer Phylogenetic Relationships in Reptiles: An Example from the Turtle Superfamily Testudinoidea

2004 • 50 citations

The SRP9/14 subunit of the human signal recognition particle binds to a variety of Alu-like RNAs and with higher affinity than its mouse homolog

1997 • 50 citations

Expression of small cytoplasmic transcripts of the rat identifier element in vivo and in cultured cells.

1987 • 50 citations

Silk worm Bm1 SINE RNA increases following cellular insults

1999 • 50 citations

Glycophorin B and glycophorin E genes arose from the glycophorin A ancestral gene via two duplications during primate evolution.

1993 • 49 citations

A Novel Abundant Family of Retroposed Elements (DAS-SINEs) in the Nine-Banded Armadillo (Dasypus novemcinctus)

2004 • 49 citations

Integration of Bombyx mori R2 Sequences into the 28S Ribosomal RNA Genes of Drosophila melanogaster

2000 • 49 citations

Structural and Functional Characterization of the Human α3 Nicotinic Subunit Gene Promoter

1997 • 49 citations

Cis-acting influences on Alu RNA levels

2000 • 46 citations

Biosynthesis and cytoplasmic distribution of small poly(A)-containing B2 RNA

1985 • 46 citations

Molecular systematics: Perfect SINEs of evolutionary history?

1999 • 46 citations

A novel family of tRNA-derived SINEs in the colugo and two new retrotransposable markers separating dermopterans from primates

2003 • 45 citations

Genomic and evolutionary analysis of Feilai, a diverse family of highly reiterated SINEs in the yellow fever mosquito, Aedes aegypti

1999 • 45 citations

Sequence Analysis of Transposable Elements in the Sea Squirt, Ciona intestinalis

2000 • 45 citations

Characterization of a third major SINE family of repetitive sequences in the galago genome

1991 • 44 citations

Evolution of SINE S1 retroposons in Cruciferae plant species

1997 • 44 citations

La Protein and the Trafficking of Nascent RNA Polymerase III Transcripts

2001 • 44 citations

K562 cells implicate increased chromatin accessibility in Alu transcriptional activation

2000 • 44 citations

The Decline in Human Alu Retroposition Was Accompanied by an Asymmetric Decrease in SRP9/14 Binding to Dimeric Alu RNA and Increased Expression of Small Cytoplasmic Alu RNA

1997 • 44 citations

The herpes simplex virus immediate-early protein ICP27 stimulates the transcription of cellular Alu repeated sequences by increasing the activity of transcription factor TFIIIC

1992 • 43 citations

B2 RNA and 7SK RNA, RNA polymerase III transcripts, have a cap-like structure at their 5′ end

1990 • 42 citations

Amplification of Distinct Subfamilies of Short Interspersed Elements During Evolution of the Salmonidae

1994 • 41 citations

Similar Target Site Selection Occurs in Integration of Plant and Mammalian Retroposons

1998 • 41 citations

Factors affecting ectopic gene conversion in mice

1998 • 40 citations

Mosaic evolution of rodent B1 elements

1996 • 40 citations

Increased levels of B1 and B2 SINE transcripts in mouse fibroblast cells due to minute virus of mice infection

2004 • 39 citations

PCR-based approach to SINE isolation: Simple and complex SINEs

2005 • 39 citations

Novel PAX6 Binding Sites in the Human Genome and the Role of Repetitive Elements in the Evolution of Gene Regulation

2002 • 39 citations

Small B2 RNAs in mouse oocytes, embryos, and somatic tissues

1988 • 38 citations

Recent Amplification of Rat ID Sequences

1996 • 38 citations

Nucleotide sequence and structure of the mouse cytokeratin endoB gene

1988 • 37 citations

Accurate 3′ End Processing and Adenylation of Human Signal Recognition Particle RNA and Alu RNA in Vitro

1998 • 36 citations

Retroviruses, Ascorbate, and Mutations, in the Evolution of Homo sapiens

1998 • 36 citations

Generality of the tRNA Origin of Short Interspersed Repetitive Elements (SINEs)

1994 • 35 citations

Evolution of CHR-2 SINEs in cetartiodactyl genomes: possible evidence for the monophyletic origin of toothed whales

2001 • 35 citations

Structures and distribution of p-SINE1 members in rice genomes

1997 • 35 citations

Nucleotide sequence of small polyadenylated B2 RNA

1985 • 35 citations

Transcription and processing of the rodent ID repeat family in germline and somatic cells

1995 • 35 citations

Birth of a Retroposon: The Twin SINE Family from the Vector Mosquito Culex pipiens May Have Originated from a Dimeric tRNA Precursor

2001 • 34 citations

Unique Mammalian tRNA-Derived Repetitive Elements in Dermopterans: The t-SINE Family and Its Retrotransposition Through Multiple Sources

2003 • 34 citations

A Novel tRNA Species as an Origin of Short Interspersed Repetitive Elements (SINEs)

1994 • 34 citations

Unique sequence organization and erythroid cell-specific nuclear factor-binding of mammalian Θ I globin promoters

1989 • 33 citations

Transcriptional Properties of BmX, a Moderately Repetitive Silkworm Gene That Is an RNA Polymerase III Template

1988 • 33 citations

Methylphosphate cap structure increases the stability of 7SK, B2 and U6 small RNAs inXenopusoocytes

1993 • 33 citations

Cap structure of U3 small nucleolar RNA in animal and plant cells is different. gamma-Monomethyl phosphate cap structure in plant RNA.

1992 • 32 citations

Activation of putative transposition intermediate formation in tumor cells.

1985 • 31 citations

The most abundant nascent poly(A)+RNAs are transcribed by RNA polymerase III in murine tumor cells

1990 • 31 citations

Evolutionary History of 4.5SH RNA

2005 • 31 citations

Terminator-specific Recycling of a B1-AluTranscription Complex by RNA Polymerase III Is Mediated by the RNA Terminus-binding Protein La

1998 • 31 citations

A small RNA in testis and brain: implications for male germ cell development

2002 • 30 citations

Identification and Characterization of a Transcriptional Silencer Upstream of the Human BRCA2 Gene

1999 • 30 citations

Evolutionary History of 4.5SI RNA and Indication That It Is Functional

2002 • 30 citations

Aberrant splicing caused by the insertion of the B2 sequence into an intron of the complement C4 gene is the basis for low C4 production in H-2k mice.

1992 • 30 citations

Analysis of the SINE S1 Pol III promoter from Brassica; impact of methylation and influence of external sequences

2001 • 29 citations

Short interspersed repeats in rabbit DNA can provide functional polyadenylation signals.

1990 • 29 citations

Identification and structural analysis of SINE elements in the Arabidopsis thaliana genome.

2001 • 28 citations

Synthesis and Processing

1998 • 28 citations

Identification of a repeated sequence in the genome of the sea urchin which is traescribed by RNA polymerase III and contains the features of a retroposon

1988 • 27 citations

Nonrandom distribution of interspersed repeat elements in the BCR and ABL1 genes and its relation to breakpoint cluster regions

2001 • 27 citations

Structure and Origin of a Novel Dimeric Retroposon B1-dID

2001 • 27 citations

An Ubiquitous Interspersed DNA Sequence Family in an Insect

1985 • 27 citations

Synthesis and Processing of Small B2 Transcripts in Mouse Embryonal Carcinoma Cells

1990 • 26 citations

Recent evolutionary acquisition of alternative pre-mRNA splicing and 3' processing regulations induced by intronic B2 SINE insertion

1997 • 26 citations

Genomic organization and promoter analysis of the human nicotinic acetylcholine receptor α6 subunit (CHNRA6) gene: Alu and other elements direct transcriptional repression

2002 • 26 citations

Palindromic sequences preceding the terminator increase polymerase III template activity

1997 • 25 citations

Solution structure of an RNA stem–loop derived from the 3′ conserved region of eel LINE UnaL2

2004 • 24 citations

Alu's dimeric consensus sequence destabilizes its transcripts

2003 • 23 citations

Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity.

2001 • 23 citations

Sjα elements, short interspersed element-like retroposons bearing a hammerhead ribozyme motif from the genome of the Oriental blood fluke Schistosoma japonicum

2000 • 22 citations

Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana

2004 • 22 citations

A B2 Repeat Insertion Generates Alternate Structures of the Mouse Muscle γ-Phosphorylase Kinase Gene

1993 • 22 citations

Methylphosphate Cap Structure in Small RNAs Reduces the Affinity of RNAs to La Protein

2002 • 22 citations

Predicting Mammalian SINE Subfamily Activity from A-tail Length

2004 • 19 citations

Characterization of a SINE species from vicuna and its distribution in animal species including the family Camelidae

2001 • 17 citations

In vivotranscription of a cloned prosimian primate SINE sequence

1989 • 15 citations

Characterization of a New Termination Signal for RNA Polymerase III Responsible for Generation of a Discrete-sized RNA Transcribed from Salmon Total Genomic DNA in a HeLa Cell Extract

1989 • 14 citations

A SINE species from hippopotamus and its distribution among animal species

1998 • 14 citations

Pseudouridylic modification of a 6S RNA transcribed invitro from highly repetitive and transcribable (Hirt) sequences of salmon total DNA

1984 • 12 citations

Growth inhibition by a triple ribozyme targeted to repetitive B2 transcripts

1999 • 12 citations

Independent Integration of Rodent Identifier (ID) Elements into Orthologous Sites of Some RT6 Alleles of Rattus norvegicus and Rattus rattus

2002 • 12 citations

Template jumping by a LINE reverse transcriptase has created a SINE-like 5S rRNA retropseudogene in Dictyostelium

2003 • 12 citations

[B2-like repetitive sequence in the genome of the American mink].

1989 • 11 citations

Sequence analysis of the human glycoprotein hormone α-subunit gene 5′-flanking DNA and identification of a potential regulatory element as an Alu repetitive sequence

2000 • 11 citations

An E-Box Sequence Acts as a Transcriptional Activator for BC1 RNA Expression by RNA Polymerase III in the Brain

1998 • 11 citations

A new pair of CR1-like LINE and tRNA-derived SINE elements in Podarcis sicula genome

2004 • 9 citations

Effect of short interspersed element sequences on the integration and expression of a reporter gene in the preimplantation-stage mouse embryos

2000 • 8 citations

R2 retrotransposition on assembled nucleosomes depends on the translational position of the target site

2002 • 7 citations