Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass
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References (95)
Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
1991 • 5,267 citations
Structure of a Covalently Trapped Catalytic Complex of HIV-1 Reverse Transcriptase: Implications for Drug Resistance
1998 • 1,420 citations
The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η
1999 • 1,273 citations
Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution
1998 • 1,164 citations
Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA
1994 • 899 citations
DNA Polymerases: Structural Diversity and Common Mechanisms
1999 • 814 citations
The complete genome of the crenarchaeon Sulfolobus solfataricus P2
2001 • 758 citations
Three-dimensional structure of the β subunit of E. coli DNA polymerase III holoenzyme: A sliding DNA clamp
1992 • 748 citations
hRAD30 Mutations in the Variant Form of Xeroderma Pigmentosum
1999 • 724 citations
Efficient Bypass of a Thymine-Thymine Dimer by Yeast DNA Polymerase, Polη
1999 • 719 citations
Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation
1998 • 682 citations
Eukaryotic polymerases ι and ζ act sequentially to bypass DNA lesions
2000 • 621 citations
Crystal Structure of a Y-Family DNA Polymerase in Action
2001 • 602 citations
Compilation, alignment, and phylogenetic relationships of DNA polymerases
1993 • 590 citations
Isolation and characterization of mutants of Escherichia coli deficient in induction of mutations by ultraviolet light
1977 • 567 citations
Deoxycytidyl transferase activity of yeast REV1 protein
1996 • 566 citations
Structure of the Replicating Complex of a Pol α Family DNA Polymerase
2001 • 536 citations
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal
1998 • 520 citations
Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis
2000 • 444 citations
All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis
2000 • 399 citations
Fidelity of Human DNA Polymerase η
2000 • 395 citations
The Mutagenesis Protein UmuC Is a DNA Polymerase Activated by UmuD′, RecA, and SSB and Is Specialized for Translesion Replication
1999 • 371 citations
Low fidelity DNA synthesis by human DNA polymerase-η
2000 • 362 citations
Structure of the Catalytic Core of S. cerevisiae DNA Polymerase η
2001 • 341 citations
Compilation and alignment of DNA polymerase sequences
1991 • 339 citations
Complete Genome Sequence of an Aerobic Thermoacidophilic Crenarchaeon, Sulfolobus tokodaii strain7
2001 • 327 citations
A universal protein–protein interaction motif in the eubacterial DNA replication and repair systems
2001 • 325 citations
MUTANTS OF YEAST DEFECTIVE IN MUTATION INDUCED BY ULTRAVIOLET LIGHT
1971 • 321 citations
Crystal Structure of the Processivity Clamp Loader Gamma (γ) Complex of E. coli DNA Polymerase III
2001 • 313 citations
The Saccharomyces cerevisiae RAD30 Gene, a Homologue of Escherichia coli dinB and umuC, Is DNA Damage Inducible and Functions in a Novel Error-Free Postreplication Repair Mechanism
1997 • 313 citations
polι, a remarkably error-prone human DNA polymerase
2000 • 309 citations
SOS Mutator DNA Polymerase IV Functions in Adaptive Mutation and Not Adaptive Amplification
2001 • 300 citations
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro
2000 • 294 citations
Domain structure, localization, and function of DNA polymerase η, defective in xeroderma pigmentosum variant cells
2001 • 275 citations
Error-prone bypass of certain DNA lesions by the human DNA polymerase κ
2000 • 274 citations
Uvm mutants of Escherichia coli K 12 deficient in UV mutagenesis
1978 • 233 citations
Physical and Functional Interactions of Human DNA Polymerase η with PCNA
2001 • 229 citations
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta
2001 • 227 citations
UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.
1989 • 222 citations
Fidelity and Processivity of DNA Synthesis by DNA Polymerase κ, the Product of the Human DINB1 Gene
2000 • 222 citations
umuDC and mucAB operons whose products are required for UV light- and chemical-induced mutagenesis: UmuD, MucA, and LexA proteins share homology.
1985 • 219 citations
Biochemical basis of SOS-induced mutagenesis in Escherichia coli : Reconstitution of in vitro lesion bypass dependent on the UmuD′ 2 C mutagenic complex and RecA protein
1998 • 202 citations
Crystal Structure of a DinB Lesion Bypass DNA Polymerase Catalytic Fragment Reveals a Classic Polymerase Catalytic Domain
2001 • 199 citations
Evidence for a second function forSaccharomyces cerevisiaeRev1p
2000 • 197 citations
Preferential Incorporation of G Opposite Template T by the Low-Fidelity Human DNA Polymerase ι
2000 • 195 citations
Archaeal DNA Replication: Identifying the Pieces to Solve a Puzzle
1999 • 195 citations
Interaction with PCNA Is Essential for Yeast DNA Polymerase η Function
2001 • 195 citations
Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily
1999 • 189 citations
Targeting of human DNA polymerase ι to the replication machinery via interaction with PCNA
2001 • 184 citations
Novel Human and Mouse Homologs of Saccharomyces cerevisiae DNA Polymerase η
1999 • 183 citations
The human DINB1 gene encodes the DNA polymerase Polθ
2000 • 182 citations
Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus.
2001 • 176 citations
Stimulation of DNA Synthesis Activity of Human DNA Polymerase κ by PCNA
2002 • 173 citations
The β clamp targets DNA polymerase IV to DNA and strongly increases its processivity
2000 • 170 citations
Molecular analysis of mutations in DNA polymerase η in xeroderma pigmentosum-variant patients
2002 • 166 citations
Regulation of SOS mutagenesis by proteolysis.
1996 • 165 citations
Escherichia coli DNA Polymerase IV Mutator Activity: Genetic Requirements and Mutational Specificity
2000 • 161 citations
The REV1 gene of Saccharomyces cerevisiae: isolation, sequence, and functional analysis
1989 • 145 citations
Structural analysis of the umu operon required for inducible mutagenesis in Escherichia coli.
1985 • 138 citations
Deletion of the Saccharomyces cerevisiae gene RAD30 encoding an Escherichia coli DinB homolog confers UV radiation sensitivity and altered mutability
1998 • 134 citations
A model for SOS-lesion-targeted mutations in Escherichia coli
2001 • 128 citations
The appearance of the UmuD'C protein complex in Escherichia coli switches repair from homologous recombination to SOS mutagenesis
1993 • 127 citations
Unique misinsertion specificity of poliota may decrease the mutagenic potential of deaminated cytosines
2001 • 117 citations
Purification and Characterization of polκ, a DNA Polymerase Encoded by the Human DINB1 Gene
2001 • 117 citations
The processivity factor β controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo
2002 • 115 citations
Specific RecA amino acid changes affect RecA–UmuD′C interaction
1998 • 113 citations
Purification of a Soluble UmuD′C Complex from Escherichia coli
1996 • 105 citations
Clamp loader structure predicts the architecture of DNA polymerase III holoenzyme and RFC
2001 • 101 citations
The two-step model of bacterial UV mutagenesis
1985 • 92 citations
Identification of a DinB/UmuC homolog in the archeon Sulfolobus solfataricus
1996 • 92 citations
A rapid method for cloning mutagenic DNA repair genes: isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a
1993 • 89 citations
Salmonella typhimurium has two homologous but different umuDC operons: cloning of a new umuDC-like operon (samAB) present in a 60-megadalton cryptic plasmid of S. typhimurium
1991 • 84 citations
Proofreading of DNA Polymerase η-dependent Replication Errors
2001 • 74 citations
dinP, a new gene in Escherichia coli, whose product shows similarities to UmuC and its homologues
1995 • 71 citations
Characterization of the umu-complementing operon from R391
1995 • 70 citations
Resistance to ultraviolet light in Pseudomonas syringae: sequence and functional analysis of the plasmid-encoded rulAB genes
1996 • 70 citations
Quantitation of the inhibition of hfr x F− recombination by the mutagenesis complex UmuD′C
1997 • 66 citations
Sequence analysis and mapping of the Salmonella typhimurium LT2 umuDC operon
1990 • 63 citations
Genomic structure, chromosomal localization and identification of mutations in the xeroderma pigmentosum variant (XPV) gene
2000 • 60 citations
Synthetic Activity of Sso DNA Polymerase Y1, an Archaeal DinB-like DNA Polymerase, Is Stimulated by Processivity Factors Proliferating Cell Nuclear Antigen and Replication Factor C
2001 • 56 citations
Mutations in human DNA polymerase eta motif II alter bypass of DNA lesions
2001 • 55 citations
Modulation of RecA Nucleoprotein Function by the Mutagenic UmuD′C Protein Complex
1998 • 54 citations
Mechanisms of dCMP Transferase Reactions Catalyzed by Mouse Rev1 Protein
2002 • 53 citations
umuDC -Mediated Cold Sensitivity Is a Manifestation of Functions of the UmuD 2 C Complex Involved in a DNA Damage Checkpoint Control
2001 • 52 citations
In vivo stability of the Umu mutagenesis proteins: a major role for RecA
1996 • 50 citations
Structural characterization of the Salmonella typhimurium LT2 umu operon
1990 • 50 citations
Human DNA Polymerase ι Promiscuous Mismatch Extension
2001 • 49 citations
Lesion Bypass by the Escherichia coli DNA Polymerase V Requires Assembly of a RecA Nucleoprotein Filament
2001 • 47 citations
Acidic Residues Critical for the Activity and Biological Function of Yeast DNA Polymerase η
2001 • 47 citations
Three Proliferating Cell Nuclear Antigen-Like Proteins Found in the Hyperthermophilic Archaeon Aeropyrum pernix : Interactions with the Two DNA Polymerases
2002 • 44 citations
Visualization of two binding sites for the Escherichia coli UmuD′2C complex (DNA pol V) on RecA-ssDNA filaments
2000 • 42 citations
Isolation and characterization of novel plasmid-encoded umuC mutants
1994 • 41 citations
Escherichia coli umuDC mutants: DNA sequence alterations and UmuD cleavage
1992 • 38 citations
Specific amino acid changes enhance the anti‐recombination activity of the UmuD′C complex
2000 • 18 citations
Mutagenic DNA repair in Escherichia coli, XX. Overproduction of UmuD′ protein results in suppression of the umuC36 mutation in excision defective bacteria
1991 • 18 citations