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Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass

Data up to Jan 2025

Published2002
Citations79
References95

Total Citations Per Year

Abstract

References (95)

Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons

1991 • 5,267 citations

Structure of a Covalently Trapped Catalytic Complex of HIV-1 Reverse Transcriptase: Implications for Drug Resistance

1998 • 1,420 citations

The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η

1999 • 1,273 citations

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution

1998 • 1,164 citations

Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA

1994 • 899 citations

DNA Polymerases: Structural Diversity and Common Mechanisms

1999 • 814 citations

The complete genome of the crenarchaeon Sulfolobus solfataricus P2

2001 • 758 citations

Three-dimensional structure of the β subunit of E. coli DNA polymerase III holoenzyme: A sliding DNA clamp

1992 • 748 citations

hRAD30 Mutations in the Variant Form of Xeroderma Pigmentosum

1999 • 724 citations

Efficient Bypass of a Thymine-Thymine Dimer by Yeast DNA Polymerase, Polη

1999 • 719 citations

Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation

1998 • 682 citations

Eukaryotic polymerases ι and ζ act sequentially to bypass DNA lesions

2000 • 621 citations

Crystal Structure of a Y-Family DNA Polymerase in Action

2001 • 602 citations

Compilation, alignment, and phylogenetic relationships of DNA polymerases

1993 • 590 citations

Isolation and characterization of mutants of Escherichia coli deficient in induction of mutations by ultraviolet light

1977 • 567 citations

Deoxycytidyl transferase activity of yeast REV1 protein

1996 • 566 citations

Structure of the Replicating Complex of a Pol α Family DNA Polymerase

2001 • 536 citations

Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

1998 • 520 citations

Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis

2000 • 444 citations

All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis

2000 • 399 citations

Fidelity of Human DNA Polymerase η

2000 • 395 citations

The Mutagenesis Protein UmuC Is a DNA Polymerase Activated by UmuD′, RecA, and SSB and Is Specialized for Translesion Replication

1999 • 371 citations

Low fidelity DNA synthesis by human DNA polymerase-η

2000 • 362 citations

Structure of the Catalytic Core of S. cerevisiae DNA Polymerase η

2001 • 341 citations

Compilation and alignment of DNA polymerase sequences

1991 • 339 citations

Complete Genome Sequence of an Aerobic Thermoacidophilic Crenarchaeon, Sulfolobus tokodaii strain7

2001 • 327 citations

A universal protein–protein interaction motif in the eubacterial DNA replication and repair systems

2001 • 325 citations

MUTANTS OF YEAST DEFECTIVE IN MUTATION INDUCED BY ULTRAVIOLET LIGHT

1971 • 321 citations

Crystal Structure of the Processivity Clamp Loader Gamma (γ) Complex of E. coli DNA Polymerase III

2001 • 313 citations

The Saccharomyces cerevisiae RAD30 Gene, a Homologue of Escherichia coli dinB and umuC, Is DNA Damage Inducible and Functions in a Novel Error-Free Postreplication Repair Mechanism

1997 • 313 citations

polι, a remarkably error-prone human DNA polymerase

2000 • 309 citations

SOS Mutator DNA Polymerase IV Functions in Adaptive Mutation and Not Adaptive Amplification

2001 • 300 citations

Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro

2000 • 294 citations

Domain structure, localization, and function of DNA polymerase η, defective in xeroderma pigmentosum variant cells

2001 • 275 citations

Error-prone bypass of certain DNA lesions by the human DNA polymerase κ

2000 • 274 citations

Uvm mutants of Escherichia coli K 12 deficient in UV mutagenesis

1978 • 233 citations

Physical and Functional Interactions of Human DNA Polymerase η with PCNA

2001 • 229 citations

Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta

2001 • 227 citations

UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

1989 • 222 citations

Fidelity and Processivity of DNA Synthesis by DNA Polymerase κ, the Product of the Human DINB1 Gene

2000 • 222 citations

umuDC and mucAB operons whose products are required for UV light- and chemical-induced mutagenesis: UmuD, MucA, and LexA proteins share homology.

1985 • 219 citations

Biochemical basis of SOS-induced mutagenesis in Escherichia coli : Reconstitution of in vitro lesion bypass dependent on the UmuD′ 2 C mutagenic complex and RecA protein

1998 • 202 citations

Crystal Structure of a DinB Lesion Bypass DNA Polymerase Catalytic Fragment Reveals a Classic Polymerase Catalytic Domain

2001 • 199 citations

Evidence for a second function forSaccharomyces cerevisiaeRev1p

2000 • 197 citations

Preferential Incorporation of G Opposite Template T by the Low-Fidelity Human DNA Polymerase ι

2000 • 195 citations

Archaeal DNA Replication: Identifying the Pieces to Solve a Puzzle

1999 • 195 citations

Interaction with PCNA Is Essential for Yeast DNA Polymerase η Function

2001 • 195 citations

Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily

1999 • 189 citations

Targeting of human DNA polymerase ι to the replication machinery via interaction with PCNA

2001 • 184 citations

Novel Human and Mouse Homologs of Saccharomyces cerevisiae DNA Polymerase η

1999 • 183 citations

The human DINB1 gene encodes the DNA polymerase Polθ

2000 • 182 citations

Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus.

2001 • 176 citations

Stimulation of DNA Synthesis Activity of Human DNA Polymerase κ by PCNA

2002 • 173 citations

The β clamp targets DNA polymerase IV to DNA and strongly increases its processivity

2000 • 170 citations

Molecular analysis of mutations in DNA polymerase η in xeroderma pigmentosum-variant patients

2002 • 166 citations

Regulation of SOS mutagenesis by proteolysis.

1996 • 165 citations

Escherichia coli DNA Polymerase IV Mutator Activity: Genetic Requirements and Mutational Specificity

2000 • 161 citations

The REV1 gene of Saccharomyces cerevisiae: isolation, sequence, and functional analysis

1989 • 145 citations

Structural analysis of the umu operon required for inducible mutagenesis in Escherichia coli.

1985 • 138 citations

Deletion of the Saccharomyces cerevisiae gene RAD30 encoding an Escherichia coli DinB homolog confers UV radiation sensitivity and altered mutability

1998 • 134 citations

A model for SOS-lesion-targeted mutations in Escherichia coli

2001 • 128 citations

The appearance of the UmuD'C protein complex in Escherichia coli switches repair from homologous recombination to SOS mutagenesis

1993 • 127 citations

Unique misinsertion specificity of poliota may decrease the mutagenic potential of deaminated cytosines

2001 • 117 citations

Purification and Characterization of polκ, a DNA Polymerase Encoded by the Human DINB1 Gene

2001 • 117 citations

The processivity factor β controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo

2002 • 115 citations

Specific RecA amino acid changes affect RecA–UmuD′C interaction

1998 • 113 citations

Purification of a Soluble UmuD′C Complex from Escherichia coli

1996 • 105 citations

Clamp loader structure predicts the architecture of DNA polymerase III holoenzyme and RFC

2001 • 101 citations

The two-step model of bacterial UV mutagenesis

1985 • 92 citations

Identification of a DinB/UmuC homolog in the archeon Sulfolobus solfataricus

1996 • 92 citations

A rapid method for cloning mutagenic DNA repair genes: isolation of umu-complementing genes from multidrug resistance plasmids R391, R446b, and R471a

1993 • 89 citations

Salmonella typhimurium has two homologous but different umuDC operons: cloning of a new umuDC-like operon (samAB) present in a 60-megadalton cryptic plasmid of S. typhimurium

1991 • 84 citations

Proofreading of DNA Polymerase η-dependent Replication Errors

2001 • 74 citations

dinP, a new gene in Escherichia coli, whose product shows similarities to UmuC and its homologues

1995 • 71 citations

Characterization of the umu-complementing operon from R391

1995 • 70 citations

Resistance to ultraviolet light in Pseudomonas syringae: sequence and functional analysis of the plasmid-encoded rulAB genes

1996 • 70 citations

Quantitation of the inhibition of hfr x F− recombination by the mutagenesis complex UmuD′C

1997 • 66 citations

Sequence analysis and mapping of the Salmonella typhimurium LT2 umuDC operon

1990 • 63 citations

Genomic structure, chromosomal localization and identification of mutations in the xeroderma pigmentosum variant (XPV) gene

2000 • 60 citations

Synthetic Activity of Sso DNA Polymerase Y1, an Archaeal DinB-like DNA Polymerase, Is Stimulated by Processivity Factors Proliferating Cell Nuclear Antigen and Replication Factor C

2001 • 56 citations

Mutations in human DNA polymerase eta motif II alter bypass of DNA lesions

2001 • 55 citations

Modulation of RecA Nucleoprotein Function by the Mutagenic UmuD′C Protein Complex

1998 • 54 citations

Mechanisms of dCMP Transferase Reactions Catalyzed by Mouse Rev1 Protein

2002 • 53 citations

umuDC -Mediated Cold Sensitivity Is a Manifestation of Functions of the UmuD 2 C Complex Involved in a DNA Damage Checkpoint Control

2001 • 52 citations

In vivo stability of the Umu mutagenesis proteins: a major role for RecA

1996 • 50 citations

Structural characterization of the Salmonella typhimurium LT2 umu operon

1990 • 50 citations

Human DNA Polymerase ι Promiscuous Mismatch Extension

2001 • 49 citations

Lesion Bypass by the Escherichia coli DNA Polymerase V Requires Assembly of a RecA Nucleoprotein Filament

2001 • 47 citations

Acidic Residues Critical for the Activity and Biological Function of Yeast DNA Polymerase η

2001 • 47 citations

Three Proliferating Cell Nuclear Antigen-Like Proteins Found in the Hyperthermophilic Archaeon Aeropyrum pernix : Interactions with the Two DNA Polymerases

2002 • 44 citations

Visualization of two binding sites for the Escherichia coli UmuD′2C complex (DNA pol V) on RecA-ssDNA filaments

2000 • 42 citations

Isolation and characterization of novel plasmid-encoded umuC mutants

1994 • 41 citations

Escherichia coli umuDC mutants: DNA sequence alterations and UmuD cleavage

1992 • 38 citations

Specific amino acid changes enhance the anti‐recombination activity of the UmuD′C complex

2000 • 18 citations

Mutagenic DNA repair in Escherichia coli, XX. Overproduction of UmuD′ protein results in suppression of the umuC36 mutation in excision defective bacteria

1991 • 18 citations

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Structure-based interpretation of missense mutations in Y-family DNA polymerases and… (2002) – DNA repair | Metascience Observatory Explorer