Mapping and quantifying mammalian transcriptomes by RNA-Seq

Basic local alignment search tool

1990 • 87,358 citations

Serial Analysis of Gene Expression

1995 • 3,659 citations

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

2008 • 2,448 citations

RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription

2007 • 2,414 citations

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

2008 • 2,354 citations

Genome-Wide Survey of Human Alternative Pre-mRNA Splicing with Exon Junction Microarrays

2003 • 1,406 citations

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

2000 • 1,356 citations

Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution

2005 • 1,152 citations

Global Identification of Human Transcribed Sequences with Genome Tiling Arrays

2004 • 1,020 citations

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

2008 • 956 citations

Genome-wide transcription and the implications for genomic organization

2007 • 701 citations

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

2004 • 554 citations

A Mef2 gene that generates a muscle-specific isoform via alternative mRNA splicing.

1994 • 218 citations

Shotgun sequencing of the human transcriptome with ORF expressed sequence tags

2000 • 217 citations

Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

2006 • 184 citations

Tag-based approaches for transcriptome research and genome annotation

2005 • 176 citations

Exon arrays provide accurate assessments of gene expression

2007 • 114 citations

Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

2005 • 101 citations

Significance of rare mRNA sequences in liver

1977 • 77 citations

In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation

2007 • 71 citations

Analysis of alternative splicing with microarrays: successes and challenges.

2004 • 71 citations