Molecular evolution of herpesviruses: genomic and protein sequence comparisons

Basic local alignment search tool

1990 • 87,358 citations

Molecular Evolutionary Genetics

1987 • 15,266 citations

Evolutionary trees from DNA sequences: A maximum likelihood approach

1981 • 14,097 citations

The rapid generation of mutation data matrices from protein sequences

1992 • 6,766 citations

Nonparametric Statistical Methods

1999 • 6,387 citations

Amino acid substitution matrices from protein blocks.

1992 • 5,998 citations

Discrete Multivariate Analysis: Theory and Practice.

1975 • 5,202 citations

CpG-rich islands and the function of DNA methylation

1986 • 3,760 citations

Phylogenetic analysis: models and estimation procedures

2018 • 2,220 citations

PHYLOGENIES FROM MOLECULAR SEQUENCES: INFERENCE AND RELIABILITY

1988 • 2,143 citations

Predicting DNA duplex stability from the base sequence.

1986 • 1,800 citations

Fundamentals of molecular evolution

1991 • 1,721 citations

Analysis of the Protein-Coding Content of the Sequence of Human Cytomegalovirus Strain AD169

1990 • 1,280 citations

Chromatin Structure and Function

1979 • 1,050 citations

Molecular cloning, functional expression, and signaling characteristics of a C-C chemokine receptor

1993 • 771 citations

Ribosomal RNA: a key to phylogeny.

1993 • 728 citations

The DNA sequence of equine herpesvirus-1

1992 • 644 citations

The Endosymbiont Hypothesis Revisited

1992 • 586 citations

Expression of Interleukin-10 Activity by Epstein-Barr Virus Protein BCRF1

1990 • 539 citations

ANIMAL VIRUS DNA REPLICATION

1989 • 520 citations

Alternative chromatin structure at CpG islands

1990 • 480 citations

Compositional constraints and genome evolution

1986 • 451 citations

Reconstructing evolutionary trees from DNA and proteinsequences: paralinear distances.

1994 • 443 citations

Over- and under-representation of short oligonucleotides in DNA sequences.

1992 • 375 citations

Latent human herpesvirus 6 infection of human monocytes/macrophages

1991 • 342 citations

Anatomy of herpes simplex virus DNA: evidence for four populations of molecules that differ in the relative orientations of their long and short components.

1975 • 337 citations

The structure and isomerization of herpes simplex virus genomes

1979 • 331 citations

Epstein-Barr virus-induced genes: first lymphocyte-specific G protein-coupled peptide receptors

1993 • 323 citations

Positive Darwinian evolution in human influenza A viruses.

1991 • 322 citations

Predominant CD4 T-lymphocyte tropism of human herpesvirus 6-related virus

1989 • 307 citations

Restriction endonucleases for pulsed field mapping of bacterial genomes

1987 • 305 citations

Human herpesvirus 6 is closely related to human cytomegalovirus

1990 • 251 citations

Patterns of gene expression and sites of latency in human nerve ganglia are different for varicella-zoster and herpes simplex viruses.

1988 • 243 citations

Association of Human Herpesvirus 6 Infection of the Central Nervous System with Recurrence of Febrile Convulsions

1993 • 212 citations

The powers and pitfalls of parsimony

1993 • 211 citations

Human DNA polymerase α: predicted functional domains and relationships with viral DNA polymerases

1989 • 201 citations

Homology between DNA polymerases of poxviruses, herpesviruses, and adenoviruses: nucleotide sequence of the vaccinia virus DNA polymerase gene.

1986 • 191 citations

Stacking energies in DNA

1991 • 177 citations

DNA methylation and chromatin structure: a view from below

1990 • 166 citations

COMPUTATIONAL DNA SEQUENCE ANALYSIS

1994 • 146 citations

Herpes Simplex and 'The Herpes Complex': Diverse Observations and A Unifying Hypothesis

1984 • 142 citations

Silent nucleotide substitutions and G+C content of some mitochondrial and bacterial genes

1986 • 131 citations

Evolutionary Comparisons of the S Segments in the Genomes of Herpes Simplex Virus Type 1 and Varicella-Zoster Virus

1986 • 131 citations

BHRF1, the Epstein-Barr virus gene with homology to Bc12, is dispensable for B-lymphocyte transformation and virus replication

1991 • 128 citations

Deviations from Expected Frequencies of CpG Dinucleotides in Herpesvirus DNAs May Be Diagnostic of Differences in the States of Their Latent Genomes

1989 • 123 citations

Statistical analyses of counts and distributions of restriction sites in DNA sequences

1992 • 120 citations

THE GENOMES OF THE HUMAN HERPESVIRUSES: Contents, Relationships, and Evolution

1989 • 116 citations

Phylogenetic analysis of nucleoproteins suggests that human influenza A viruses emerged from a 19th-century avian ancestor.

1990 • 92 citations

Evolutionary relationships of virion glycoprotein genes in the S regions of alphaherpesvirus genomes

1990 • 91 citations

Equine Herpesviruses 2 and 5 Are γ-Herpesviruses

1993 • 90 citations

Genetic relationships between bovine herpesvirus 4 and the gammaherpesviruses epstein-Barr virus and herpesvirus saimiri

1992 • 87 citations

Analysis of biochemical genetic data on Jewish populations: II. Results and interpretations of heterogeneity indices and distance measures with respect to standards.

1979 • 87 citations

Contrasts in codon usage of latent versus productive genes of Epstein-Barr virus: data and hypotheses

1990 • 85 citations

Analysis of Bovine Cytomegalovirus Genome Structure: Cloning and Mapping of the Monomeric Polyrepetitive DNA Unit, and Comparison of European and American Strains

1985 • 81 citations

Properties of the human herpesvirus 6 strain Z29 genome: G + C content, length, and presence of variable-length directly repeated terminal sequence elements

1991 • 79 citations

Molecular biology of bovine herpesvirus type 4

1992 • 78 citations

Variable expression of latent membrane protein in nasopharyngeal carcinoma can be related to methylation status of the Epstein-Barr virus BNLF-1 5'-flanking region

1991 • 78 citations

The A+T-rich genome of Herpesvirus saimiri contains a highly conserved gene for thymidylate synthase.

1986 • 77 citations

A Gene for Dihydrofolate Reductase in a Herpesvirus

1988 • 73 citations

Conservation of gene organization in the lymphotropic herpesviruses herpesvirus Saimiri and Epstein-Barr virus

1988 • 72 citations

Identification of a transactivating function mapping to the putative immediate-early locus of human herpesvirus 6

1991 • 71 citations

THE ORGANIZATION OF THE HERPES SIMPLEX VIRUS GENOMES

1979 • 71 citations

Retroviral insertions into a herpesvirus are clustered at the junctions of the short repeat and short unique sequences.

1993 • 70 citations

On the nature of origins of DNA replication in eukaryotes

1992 • 69 citations

Characterization of the Genome of Equine Herpesvirus 1 Subtype 2

1988 • 69 citations

Characterization of the DNA polymerase gene of human herpesvirus 6

1991 • 67 citations

DNA in profile

1991 • 65 citations

Host cell phenotype-dependent methylation patterns of Epstein--Barr virus DNA

1991 • 60 citations

Methylation of discrete sites within the enhancer region regulates the activity of the Epstein-Barr virus BamHI W promoter in Burkitt lymphoma lines

1992 • 59 citations

Bovine Herpesvirus 4 Genome: Cloning, Mapping and Strain Variation Analysis

1990 • 55 citations

Structural organization of the conserved gene block of Herpesvirus saimiri coding for DNA polymerase, glycoprotein B, and major DNA binding protein

1990 • 53 citations

The virulence-determining genomic BamHI fragment 4 of pseudorabies virus contains genes corresponding to the UL15 (partial), UL18, UL19, UL20, and UL21 genes of herpes simplex virus and a putative origin of replication

1992 • 50 citations

Varicella-Zoster Virus Specifies a Thymidylate Synthetase

1987 • 50 citations

Determining evolutionary distances from highly diverged nucleic acid sequences: Operator metrics

1987 • 49 citations

Identification and characterization of a human herpesvirus 6 gene segment that trans activates the human immunodeficiency virus type 1 promoter

1992 • 48 citations

The nucleotide sequence of the glycoprotein gB gene of infectious laryngotracheitis virus: analysis and evolutionary relationship to the homologous gene from other herpesviruses

1991 • 46 citations

Nuclear localization of herpesvirus proteins: potential role for the cellular framework.

1983 • 40 citations

Homology of the envelope glycoprotein B of human herpesvirus-6 and cytomegalovirus

1992 • 40 citations

Nucleotide sequence analysis of genes encoding glycoproteins D and J in simian herpes B virus

1992 • 30 citations

Properties and evolutionary relationships of the Marek's disease virus homologues of protein kinase, glycoprotein D and glycoprotein I of herpes simplex virus

1991 • 29 citations

Evidence for selective evolution in codon usage in conserved amino acid segments of human alphaherpesvirus proteins

1991 • 28 citations

Nuclear Localization of Herpesvirus Proteins: Potential Role for the Cellular Framework

1983 • 24 citations