Evaluation of Gene-Finding Programs on Mammalian Sequences

Basic local alignment search tool

1990 • 87,358 citations

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1997 • 71,835 citations

A tutorial on hidden Markov models and selected applications in speech recognition

1989 • 22,242 citations

Basic Local Alignment Search Tool

1990 • 12,947 citations

A First Course in Stochastic Processes

1975 • 4,107 citations

Prediction of complete gene structures in human genomic DNA

1997 • 4,041 citations

GeneMark.hmm: new solutions for gene finding

1998 • 1,521 citations

2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans

1994 • 1,472 citations

The DNA sequence of human chromosome 22

1999 • 1,167 citations

The complete DNA sequence of yeast chromosome III

1992 • 851 citations

GenBank

2000 • 803 citations

Evaluation of Gene Structure Prediction Programs

1996 • 753 citations

A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence

1998 • 745 citations

Finding the genes in genomic DNA

1998 • 572 citations

A survey on intron and exon lengths

1988 • 569 citations

Frequent Alternative Splicing of Human Genes

1999 • 553 citations

ELEMENTS OF STOCHASTIC PROCESSES

1975 • 432 citations

[10] Entrez: Molecular biology database and retrieval system

1996 • 420 citations

Assessment of protein coding measures

1992 • 404 citations

A generalized hidden Markov model for the recognition of human genes in DNA.

1996 • 393 citations

Prediction of gene structure

1992 • 366 citations

A minimal intron length but no specific internal sequence is required for splicing the large rabbit β-globin intron

1984 • 328 citations

Gene recognition via spliced sequence alignment.

1996 • 311 citations

Two methods for improving performance of an HMM and their application for gene finding.

1997 • 294 citations

Identification of protein coding regions in the human genome by quadratic discriminant analysis

1997 • 286 citations

Computational methods for the identification of genes in vertebrate genomic sequences

1997 • 264 citations

Statistical analysis of vertebrate sequences reveals that long genes are scarce in GC-rich isochores

1995 • 246 citations

An Exploration of the Sequence of a 2.9-Mb Region of the Genome of Drosophila melanogaster: The Adh Region

1999 • 239 citations

Identification of Protein Coding Regions In Genomic DNA

1995 • 232 citations

A Tool for Analyzing and Annotating Genomic Sequences

1997 • 227 citations

Selection of splice sites in pre-mRNAs with short internal exons.

1991 • 224 citations

HOVERGEN: a database of homologous vertebrate genes

1994 • 218 citations

The gene distribution of the human genome

1996 • 199 citations

Protein-length distributions for the three domains of life

2000 • 187 citations

Ancient Conserved Regions in New Gene Sequences and the Protein Databases

1993 • 179 citations

Gene Structure Prediction by Linguistic Methods

1994 • 173 citations

Assessing protein coding region integrity in cDNA sequencing projects.

1998 • 163 citations

The gene identification problem: An overview for developers

1996 • 149 citations

The isochore organization of the human genome and its evolutionary history — a review

1993 • 135 citations

A Decision Tree System for Finding Genes in DNA

1998 • 118 citations

Identification of human gene structure using linear discriminant functions and dynamic programming.

1995 • 104 citations

An improved system for exon recognition and gene modeling in human DNA sequences.

1994 • 93 citations

Selection of Splice Sites in Pre-mRNAs with Short Internal Exons

1991 • 89 citations

Divergently Transcribed Overlapping Genes Expressed in Liver and Kidney and Located in the 11p15.5 Imprinted Domain

1998 • 68 citations

Distinctive Sequence Features in Protein Coding Genic Non-coding, and Intergenic Human DNA

1995 • 49 citations

Evaluation of the Exon Predictions of the GRAIL Software

1994 • 43 citations

Overlapping genes of Drosophila melanogaster: organization of the z600-gonadal-Eip28/29 gene cluster.

1989 • 29 citations