Back to search

On the role of magnesium ions in RNA stability

Data up to Jan 2025

Published1998
Citations342
References140

Total Citations Per Year

Abstract

References (140)

Dominant forces in protein folding

1990 • 3,682 citations

The physical chemistry of electrolytic solutions

1950 • 3,057 citations

Limiting Laws and Counterion Condensation in Polyelectrolyte Solutions I. Colligative Properties

1969 • 2,920 citations

Theoretical aspects of DNA-protein interactions: Co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice

1974 • 2,905 citations

The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides

1978 • 2,873 citations

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

1978 • 1,651 citations

Crystal Structure of a Group I Ribozyme Domain: Principles of RNA Packing

1996 • 1,240 citations

Simple RNA enzymes with new and highly specific endoribonuclease activities

1988 • 1,118 citations

Chemistry of the metal chelate compounds

1953 • 1,006 citations

Three-dimensional structure of a hammerhead ribozyme

1994 • 944 citations

A small catalytic oligoribonucleotide

1987 • 938 citations

The Physical Chemistry of Electrolytic Solutions.

1958 • 879 citations

Cation Selective Glass Electrodes and their Mode of Operation

1962 • 844 citations

The crystal structure of an AII-RNAhammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage

1995 • 675 citations

Counterion binding in polyelectrolyte theory

1979 • 615 citations

Metal ions in solution

1979 • 609 citations

Reevaluation of the Born model of ion hydration

1985 • 569 citations

Calculating total electrostatic energies with the nonlinear Poisson-Boltzmann equation

1990 • 549 citations

Ionic selectivity revisited: The role of kinetic and equilibrium processes in ion permeation through channels

1983 • 535 citations

Macroscopic models of aqueous solutions: biological and chemical applications

1993 • 520 citations

Ionic hydration in chemistry and biophysics

1982 • 515 citations

Ribozymes: A Distinct Class of Metalloenzymes

1993 • 440 citations

The Physical and Chemical Properties of Nucleic Acids

1967 • 416 citations

Capturing the Structure of a Catalytic RNA Intermediate: The Hammerhead Ribozyme

1996 • 407 citations

The B-DNA Dodecamer at High Resolution Reveals a Spine of Water on Sodium,

1998 • 399 citations

Modern Electrochemistry

1970 • 394 citations

Metals, Motifs, and Recognition in the Crystal Structure of a 5S rRNA Domain

1997 • 392 citations

Structural analysis of spermine and magnesium ion binding to yeast phenylalanine transfer RNA.

1978 • 377 citations

The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone

1998 • 373 citations

Role of divalent metal ions in the hammerhead RNA cleavage reaction

1991 • 365 citations

Macromolecular binding

1975 • 364 citations

Polye1ectrolytes

1971 • 354 citations

Visualizing the Higher Order Folding of a Catalytic RNA Molecule

1991 • 354 citations

Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd, and Cd

1993 • 353 citations

Computational Methods to Predict Binding Free Energy in Ligand-Receptor Complexes

1995 • 345 citations

A crystallographic study of metal-binding to yeast phenylalanine transfer RNA

1977 • 322 citations

Kinetic Intermediates in RNA Folding

1994 • 306 citations

A magnesium ion core at the heart of a ribozyme domain

1997 • 294 citations

Salt-Nucleic Acid Interactions

1995 • 288 citations

The electrostatic potential of B‐DNA

1989 • 263 citations

A Kinetic and Thermodynamic Framework for the Hammerhead Ribozyme Reaction

1994 • 261 citations

Further refinement of the structure of yeast tRNAPhe

1978 • 243 citations

Polyelectrolyte Theories and their Applications to DNA

1982 • 234 citations

Heats of the helix–coil transitions of the poly A–poly U complexes

1968 • 230 citations

Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams

1972 • 228 citations

Metal-binding sites in the major groove of a large ribozyme domain

1996 • 219 citations

An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme

1993 • 214 citations

RNA folding causes secondary structure rearrangement

1998 • 214 citations

A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor

1998 • 210 citations

Renaturation of transfer ribonucleic acids through site binding of magnesium.

1966 • 200 citations

ION DISTRIBUTIONS AROUND DNA AND OTHER CYLINDRICAL POLYIONS: Theoretical Descriptions and Physical Implications

1990 • 183 citations

Conformational changes of transfer RNA. The role of magnesium(II)

1976 • 182 citations

Effects of phosphorothioate and 2-amino groups in hammerhead ribozymes on cleavage rates and magnesium binding

1991 • 182 citations

Tertiary Structure in Transfer Ribonucleic Acids

1966 • 175 citations

Salt Effects on Ligand-DNA Binding

1994 • 173 citations

Chain Model for Polyelectrolytes. VII. Potentiometric Titration and Ion Binding in Solutions of Linear Polyelectrolytes

1962 • 160 citations

tRNA Conformation and Magnesium Binding. A Study of Yeast Phenylalanine-Specific tRNA by a Fluorescent Indicator and Differential Melting Curves

1975 • 159 citations

Biological macromolecules and polyelectrolytes in solution

1977 • 159 citations

Stabilization of RNA Structure by Mg Ions

1994 • 151 citations

Ionic distributions near polyelectrolytes. A comparison of theoretical approaches

1985 • 148 citations

Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine

1997 • 143 citations

Ionic interactions and the global conformations of the hammerhead ribozyme

1995 • 141 citations

Metal ion requirements for sequence-specific endoribonuclease activity of the Tetrahymena ribozyme

1989 • 139 citations

RNA pseudoknots

1990 • 136 citations

Transfer RNA in Solution: Selected Topics

1980 • 130 citations

Raman spectroscopic study of the effects of Ca2+, Mg2+, Zn2+, and Cd2+ ions on calf thymus DNA: Binding sites and conformational changes

1990 • 127 citations

Relationship between 2'-hydroxyls and magnesium binding in the hammerhead RNA domain: a model for ribozyme catalysis

1991 • 123 citations

Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters, and base-pair propeller twist angles

1986 • 120 citations

Salt effects on polyelectrolyte–ligand binding: Comparison of Poisson–Boltzmann, and limiting law/counterion binding models

1995 • 119 citations

Interaction of metallic cations with DNA VI. Specific binding of Mg++ and Mn++

1973 • 117 citations

Proton magnetic relaxation studies of manganous complexes of transfer RNA and related compounds

1969 • 115 citations

Interaction of Nucleic Acids

2021 • 114 citations

Polyelectrolyte electrostatics: Salt dependence, entropic, and enthalpic contributions to free energy in the nonlinear Poisson–Boltzmann model

1995 • 112 citations

Thermodynamic analysis of transfer RNA unfolding

1978 • 111 citations

The binding of Mg++ ions to polyadenylate, polyuridylate, and their complexes

1971 • 110 citations

The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding

1996 • 109 citations

Interactions of polyelectrolytes with simple electrolytes. II. Donnan equilibria obtained with DNA in solutions of 1-1 electrolytes

1967 • 108 citations

Mg2+-Dependent Conformational Changes in the Hammerhead Ribozyme

1996 • 108 citations

Equilibrium binding of magnesium(II) by Escherichia coli tRNAfMet

1976 • 106 citations

Magnesium Ions Are Required by Bacillus subtilis Ribonuclease P RNA for both Binding and Cleaving Precursor tRNAAsp

1996 • 103 citations

Interaction of manganese with fragments, complementary fragment recombinations, and whole molecules of yeast phenylalanine specific transfer RNA

1974 • 102 citations

Nuclear magnetic resonance studies of the hammerhead ribozyme domain

1991 • 96 citations

Cooperative Binding of Manganese (II) to Transfer RNA

1970 • 96 citations

Cooperative binding of magnesium to transfer ribonucleic acid studied by a fluorescent probe

1974 • 95 citations

The interaction of polynucleotides with cations

1959 • 95 citations

Two major tertiary folding transitions of the Tetrahymena catalytic RNA.

1994 • 94 citations

Structure of the titanium-iron cyanide complexes

1968 • 94 citations

Thermodynamic studies of transfer ribonucleic acids. I. Magnesium binding to yeast phenylalanine transfer ribonucleic acid

1972 • 89 citations

Affinities and selectivities of divalent cation binding sites within an RNA tertiary structure

1997 • 89 citations

Colligative properties of polyelectrolyte solutions in excess of salt

1963 • 86 citations

Effects of Mg2+, K+, and H+ on an equilibrium between alternative conformations of an RNA pseudoknot

1997 • 85 citations

tRNA structure and binding sites for cations

1972 • 77 citations

Electron Paramagnetic Resonance Spectroscopic Measurement of Mn2+ Binding Affinities to the Hammerhead Ribozyme and Correlation with Cleavage Activity

1998 • 76 citations

Salt dependence of oligoion-polyion binding: a thermodynamic description based on preferential interaction coefficients

1993 • 74 citations

Mechanism of electrophilic reactions of carbon-metal bonded platinum(II) complexes. Comparison between transition and post-transition organometallic compounds

1967 • 69 citations

The internal equilibrium of the hammerhead ribozyme reaction

1995 • 69 citations

Bases Defining an Ammonium and Magnesium Ion-Dependent Tertiary Structure Within the Large Subunit Ribosomal RNA

1994 • 65 citations

Thermodynamic and kinetic parameters of ion condensation to polynucleotides

1976 • 63 citations

Hydration Effects Accompanying the Substitution of Counterions in the Ionic Atmosphere of Poly(rA)·Poly(rU) and Poly(rA)·2Poly(rU) Helices

1996 • 62 citations

Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks.

1996 • 62 citations

The Electrostatic Contribution to the B to Z Transition of DNA

1996 • 61 citations

Application of Polyelectrolyte Theories for Analysis of DNA Melting in the Presence of Na+ and Mg2+ Ions

1998 • 59 citations

Monovalent and Divalent Salt Effects on Electrostatic Free Energies Defined by the Nonlinear Poisson−Boltzmann Equation: Application to DNA Binding Reactions

1997 • 59 citations

25 Mg NMR in DNA solutions: Dominance of site binding effects

1980 • 59 citations

Demonstration and origin of six tertiary base pair resonances in the NMR spectrum of E. coli tRNAVal1

1975 • 56 citations

Allosteric interpretation of Mg2+ ion binding to the denaturable Escherichia coli tRNAGlu2

1976 • 54 citations

Electrical potential of transfer RNAs: codon-anticodon recognition

1990 • 53 citations

Magnesium ion inner sphere complex in the anticodon loop of tRNAPhe

1982 • 51 citations

Folding of an mRNA Pseudoknot Required for Stop Codon Readthrough: Effects of Mono- and Divalent Ions on Stability

1997 • 51 citations

Effects of Divalent Metal Ions on Individual Steps of the Tetrahymena Ribozyme Reaction

1997 • 50 citations

Specific ammonium ion requirement for functional ribosomal RNA tertiary structure

1993 • 50 citations

A Simple Interpretation of Donnan Equilibria Obtained with Long Chain Polyphosphates1

1958 • 48 citations

Electrostatic effects in divalent ion binding to tRNA

1977 • 46 citations

Characterization of the secondary structure and melting of a self-cleaved RNA hammerhead domain by proton NMR spectroscopy

1990 • 46 citations

Interactions of polyelectrolytes with simple electrolytes. III. The binding of magnesium ion by deoxyribonucleic acid

1968 • 45 citations

The mode of Mg++binding to oligonucleotides. Inner sphere complexes as markers for recognition?

1979 • 44 citations

On the coordination properties of Eu3+ bound to tRNA

1985 • 43 citations

Ionic distributions and competitive association in DNA/mixed salt solutions

1988 • 42 citations

Anticodon loop of tRNAPhe: structure, dynamics, and magnesium binding

1986 • 41 citations

Europium as a fluorescent probe of metal binding sites on transfer ribonucleic acid. I. Binding to Escherichia coli formylmethionine transfer ribonucleic acid

1974 • 41 citations

Equilibrium Unfolding (Folding) Pathway of a Model H-type Pseudoknotted RNA: The Role of Magnesium Ions in Stability

1998 • 38 citations

Biostructural chemistry of magnesium ion: characterization of the weak binding sites on tRNAPhe(yeast). Implications for conformational change and activity

1990 • 37 citations

Role of Divalent Ions in Folding of tRNA

1977 • 37 citations

Thermodynamics of Folding of the RNA Pseudoknot of the T4 Gene 32 Autoregulatory Messenger RNA

1996 • 36 citations

The Interaction of Na Ions with Synthetic Polynucleotides

1972 • 33 citations

Significance and mechanism of divalent-ion binding to transfer RNA

1982 • 31 citations

Effect of cations on tRNA structure

1977 • 31 citations

Polyelectrolyte Solutions: A Theoretical Introduction

1963 • 30 citations

Polyelectrolyte solutions: A theoretical introduction

1962 • 30 citations

Theory of Protein Solutions. I

1955 • 29 citations

Coordination chemistry of magnesium ions and 5S rRNA (Escherichia coli): binding parameters, ligand symmetry, and implications for activity

1991 • 28 citations

Interaction of magnesium ions with poly A and poly U

1971 • 28 citations

On the binding of Mg2+ and Mn2+ to tRNA

1977 • 27 citations

Divalent metal ions and the internal equilibrium of the hammerhead ribozyme

1995 • 23 citations

Sequence selective coordination of Mg2+(aq) to DNA

1993 • 23 citations

Ultrasonic study of the kinetics of counterion site binding in aqueous solutions of polyelectrolytes

1974 • 21 citations

Metal Ion Dependence of Active-Site Structure of the Tetrahymena Ribozyme Revealed by Site-Specific Photo-crosslinking

1994 • 19 citations

Metallobiochemistry of a ribosomal RNA. A possible role for Na+ and K+ in the regulation of Mg2+ binding sites on Escherichia coli 5S rRNA: implications for activity

1991 • 9 citations

Bound states in electrolyte solutions: Theory of ion association

1996 • 6 citations

Gametogenesis: Keeping the male element under control

1998 • 3 citations

Cited By (0)

Loading...
On the role of magnesium ions in RNA stability (1998) – Biopolymers | Metascience Observatory Explorer