The Protein Folding Network

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The large-scale organization of metabolic networks

2000 • 4,250 citations

Diameter of the World-Wide Web

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The structure of scientific collaboration networks

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Hierarchical organization in complex networks

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Protein folding funnels: a kinetic approach to the sequence-structure relationship.

1992 • 923 citations

From the Cover: The structure of scientific collaboration networks

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The topology of multidimensional potential energy surfaces: Theory and application to peptide structure and kinetics

1997 • 785 citations

Intermediates and barrier crossing in a random energy model (with applications to protein folding)

1989 • 748 citations

"New View" of Protein Folding Reconciled with the Old Through Multiple Unfolding Simulations

1997 • 514 citations

On the transition coordinate for protein folding

1998 • 502 citations

Fast Kinetics and Mechanisms in Protein Folding

2000 • 484 citations

Is there a unifying mechanism for protein folding?

2003 • 453 citations

Protein folding in the landscape perspective: Chevron plots and non-arrhenius kinetics

1998 • 447 citations

Small-world view of the amino acids that play a key role in protein folding

2002 • 386 citations

Protein folding funnels: the nature of the transition state ensemble

1996 • 326 citations

Aspects of Protein Reaction Dynamics: Deviations from Simple Behavior

1999 • 306 citations

The large-scale organization of metabolic networks

2011 • 294 citations

Evaluation of a fast implicit solvent model for molecular dynamics simulations

2001 • 293 citations

Uncovering Network Systems Within Protein Structures

2003 • 287 citations

The role of side-chain interactions in the early steps of aggregation: Molecular dynamics simulations of an amyloid-forming peptide from the yeast prion Sup35

2003 • 262 citations

The Levinthal paradox: yesterday and today

1997 • 262 citations

Network Topology of a Potential Energy Landscape: A Static Scale-Free Network

2002 • 196 citations

Free energy disconnectivity graphs: Application to peptide models

2002 • 177 citations

Folding simulations of a three-stranded antiparallel β-sheet peptide

2000 • 175 citations

Parallel protein-unfolding pathways revealed and mapped

2003 • 153 citations

Continuum Secondary Structure Captures Protein Flexibility

2002 • 148 citations

Thermodynamics and Kinetics of Folding of Two Model Peptides Investigated by Molecular Dynamics Simulations

2000 • 139 citations

De novo design of a monomeric three‐stranded antiparallel β‐sheet

1999 • 136 citations

Molecular dynamics simulations of protein folding from the transition state

2002 • 133 citations

Structure, Folding, and Energetics of Cooperative Interactions between the β-Strands of a de Novo Designed Three-Stranded Antiparallel β-Sheet Peptide

2000 • 110 citations

Small-world networks and the conformation space of a short lattice polymer chain

2001 • 98 citations

Weak temperature dependence of the free energy surface and folding pathways of structured peptides

2002 • 67 citations

Role of native topology investigated by multiple unfolding simulations of four SH3 domains

2001 • 59 citations

Free Energy Surface of the Helical Peptide Y(MEARA)₆

2000 • 59 citations

Fast protein folding kinetics

2003 • 58 citations

Fast protein folding on downhill energy landscape

2003 • 38 citations

Local Interactions Drive the Formation of Nonnative Structure in the Denatured State of Human α-Lactalbumin: A High Resolution Structural Characterization of a Peptide Model in Aqueous Solution^,

1999 • 30 citations