Options available—from start to finish—for obtaining data from DNA microarrays II

Gene Ontology: tool for the unification of biology

2000 • 38,297 citations

Cluster analysis and display of genome-wide expression patterns

1998 • 16,410 citations

Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring

1999 • 11,586 citations

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

2001 • 10,602 citations

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

2000 • 9,712 citations

Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray

1995 • 9,575 citations

Gene expression profiling predicts clinical outcome of breast cancer

2002 • 9,314 citations

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

1997 • 4,531 citations

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

2002 • 3,503 citations

Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks

2001 • 2,626 citations

The R Project in Statistical Computing

2001 • 2,562 citations

Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning

2002 • 2,400 citations

Prediction of central nervous system embryonal tumour outcome based on gene expression

2002 • 2,359 citations

Knowledge-based analysis of microarray gene expression data by using support vector machines

2000 • 2,328 citations

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

1998 • 2,266 citations

High density synthetic oligonucleotide arrays

1999 • 2,256 citations

Multiclass cancer diagnosis using tumor gene expression signatures

2001 • 2,021 citations

Molecular classification of cutaneous malignant melanoma by gene expression profiling

2000 • 2,011 citations

The Transcriptional Program in the Response of Human Fibroblasts to Serum

1999 • 1,994 citations

Microarray data normalization and transformation

2002 • 1,956 citations

Delineation of prognostic biomarkers in prostate cancer

2001 • 1,694 citations

Gene-microarray analysis of multiple sclerosis lesions yields new targets validated in autoimmune encephalomyelitis

2002 • 1,644 citations

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes.

1996 • 1,629 citations

Genome-wide analysis of DNA copy-number changes using cDNA microarrays

1999 • 1,445 citations

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

2001 • 1,297 citations

Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

1990 • 1,258 citations

A Concise Guide to cDNA Microarray Analysis

2000 • 964 citations

Assembly of microarrays for genome-wide measurement of DNA copy number

2001 • 948 citations

Creating the Gene Ontology Resource: Design and Implementation

2001 • 941 citations

Microarrays of cells expressing defined cDNAs

2001 • 920 citations

Creating the gene ontology resource: design and implementation.

2001 • 831 citations

Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

1999 • 725 citations

Quantitative mapping of amplicon structure by array CGH identifies CYP24 as a candidate oncogene

2000 • 598 citations

From patterns to pathways: gene expression data analysis comes of age

2002 • 580 citations

Statistical design and the analysis of gene expression microarray data

2007 • 565 citations

BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data

2002 • 471 citations

Statistical design and the analysis of gene expression microarray data

2001 • 469 citations

Options available — from start to finish — for obtaining expression data by microarray

1999 • 449 citations

Understanding and Using the Medical Subject Headings (MeSH) Vocabulary to Perform Literature Searches

1994 • 434 citations

Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse

2000 • 423 citations

An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression

2001 • 313 citations

Optimization of oligonucleotide-based DNA microarrays

2002 • 289 citations

Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arrays

2000 • 282 citations

A Bacterial Artificial Chromosome Library for Sequencing the Complete Human Genome

2001 • 281 citations

Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range

2002 • 255 citations

High-Density Microarray-Mediated Gene Expression Profiling of Escherichia coli

2001 • 246 citations

Quantitative quality control in microarray image processing and data acquisition

2001 • 235 citations

Rapid p53 sequence analysis in primary lung cancer using an oligonucleotide probe array

1999 • 233 citations

Shotgun DNA microarrays and stage‐specific gene expression in Plasmodium falciparum malaria

2000 • 214 citations

DNA Microarrays: A Molecular Cloning Manual

2003 • 212 citations

Delineating developmental and metabolic pathwaysin vivoby expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays

2001 • 206 citations

Sensitivity Issues in DNA Array-Based Expression Measurements and Performance of Nylon Microarrays for Small Samples

1999 • 194 citations

When the chips are down

2001 • 181 citations

OligoArray: genome-scale oligonucleotide design for microarrays

2002 • 161 citations

Microarray databases: standards and ontologies

2002 • 160 citations

An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis

2002 • 149 citations

Artificial neural networks and gene filtering distinguish between global gene expression profiles of Barrett's esophagus and esophageal cancer.

2002 • 137 citations

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls

2001 • 121 citations

The African trypanosome genome

2000 • 110 citations

A Novel Chromatin Immunoprecipitation and Array (CIA) Analysis Identifies a 460-kb CENP-A-Binding Neocentromere DNA

2001 • 107 citations

Normalizing DNA Microarray Data

2002 • 104 citations

Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones

2001 • 103 citations

DNA array profiling of gene expression changes during maize embryo development

2002 • 93 citations

DNA Microarrays: A Molecular Cloning Manual

2003 • 88 citations

A comparison of microarray databases

2001 • 85 citations

Local Mean Normalization of Microarray Element Signal Intensities across an Array Surface: Quality Control and Correction of Spatially Systematic Artifacts

2002 • 70 citations

Sharing gene expression data: an array of options

2001 • 58 citations

Expression profile of genes in non-small cell lung carcinomas from long-term surviving patients.

2002 • 56 citations

GP3: GenePix post-processing program for automated analysis of raw microarray data

2002 • 45 citations

Of Chips and ChIPs

2002 • 36 citations

Microarray gene expression database: progress towards an international repository of gene expression data.

2001 • 18 citations

A development environment for predictive modelling in foods

2002 • 10 citations

MEDLINE and MeSH

1992 • 10 citations

Coming to terms with microarrays

2002 • 5 citations