SGP-1: Prediction and Validation of Homologous Genes Based on Sequence Alignments

Basic local alignment search tool

1990 • 87,358 citations

Basic Local Alignment Search Tool

1990 • 12,947 citations

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1970 • 11,049 citations

Prediction of complete gene structures in human genomic DNA

1997 • 4,041 citations

Algorithms on Strings, Trees and Sequences

1997 • 3,023 citations

Efficient string matching

1975 • 2,903 citations

Algorithms on strings, trees, and sequences

1997 • 1,800 citations

A time-efficient, linear-space local similarity algorithm

1991 • 984 citations

The Origins of Genomic Duplications in Arabidopsis

2000 • 973 citations

Alignment of whole genomes

1999 • 918 citations

Rates of DNA Sequence Evolution Differ Between Taxonomic Groups

1986 • 793 citations

Evaluation of Gene Structure Prediction Programs

1996 • 753 citations

Finding the genes in genomic DNA

1998 • 572 citations

Extensive Duplication and Reshuffling in the Arabidopsis Genome

2000 • 513 citations

An evaluation of the molecular clock hypothesis using mammalian DNA sequences

1987 • 453 citations

Human and Mouse Gene Structure: Comparative Analysis and Application to Exon Prediction

2000 • 382 citations

Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

1997 • 325 citations

Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence

2000 • 324 citations

Gene recognition via spliced sequence alignment.

1996 • 311 citations

DNA sequence evolution: the sounds of silence

1995 • 255 citations

The Complete Sequence of 340 kb of DNA around the Rice Adh1–Adh2 Region Reveals Interrupted Colinearity with Maize Chromosome 4

2000 • 231 citations

An Assessment of Gene Prediction Accuracy in Large DNA Sequences

2000 • 217 citations

Assembling Genes from Predicted Exons in Linear Time with Dynamic Programming

1998 • 109 citations

[6] Searching through sequence databases

1990 • 94 citations

DNA Composition, Codon Usage and Exon Prediction

1997 • 79 citations

The conserved exon method for gene finding.

2000 • 74 citations

Molecular evolution and phylogeny of the human AIDS viruses LAV, HTLV-III, and ARV

1987 • 65 citations

Chaining multiple-alignment fragments in sub-quadratic time

1995 • 39 citations

Genome sequence comparisons: Hurdles in the fast lane to functional genomics

2000 • 24 citations

Gene recognition via spliced alignment

2000 • 22 citations

Computational methods for exon detection

1998 • 16 citations

Prediction of the exon-intron structure by comparison of genomic sequences

2000 • 7 citations

[Prediction of the exon-intron structure by comparing nucleotide sequences from various genomes].

2000 • 3 citations