SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1994 • 63,397 citations

The neighbor-joining method: a new method for reconstructing phylogenetic trees.

1987 • 59,130 citations

CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP

1985 • 39,646 citations

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1980 • 28,067 citations

Improved tools for biological sequence comparison.

1988 • 11,455 citations

The Jackknife, the Bootstrap and Other Resampling Plans

1982 • 7,816 citations

Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology

1971 • 6,301 citations

PAUP (phylogenetic analysis using parsimony)

2008 • 4,484 citations

fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood

1994 • 1,146 citations

Estimating the pattern of nucleotide substitution

1994 • 1,083 citations

A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes.

1985 • 1,064 citations

Estimation of evolutionary distance between nucleotide sequences.

1984 • 945 citations

Database on the structure of large ribosomal subunit RNA

1996 • 508 citations

The genetic data environment an expandable GUI for multiple sequence analysis

1994 • 453 citations

Reconstructing evolutionary trees from DNA and proteinsequences: paralinear distances.

1994 • 443 citations

Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference

1992 • 342 citations

Recovering a tree from the leaf colourations it generates under a Markov model

1994 • 332 citations

Inferring phylogenies from DNA sequences of unequal base compositions.

1995 • 255 citations

Multiple aligned sequence editor (MASE)

1988 • 125 citations

A statistical test of phylogenies estimated from sequence data.

1989 • 107 citations

Phylogenetic position of foraminifera inferred from LSU rRNA gene sequences.

1994 • 78 citations