Multicopy molecular dynamics simulations suggest how to reconcile crystallographic and product formation data for camphor enantiomers bound to cytochrome P-450cam
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References (36)
Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes
1977 • 19,896 citations
The missing term in effective pair potentials
1987 • 12,201 citations
High-resolution crystal structure of cytochrome P450cam
1987 • 1,396 citations
Cytochrome P-450. Multiplicity of isoforms, substrates, and catalytic and regulatory mechanisms
1991 • 675 citations
Reactions and significance of cytochrome P-450 enzymes
1991 • 596 citations
Crystal structure of substrate-free Pseudomonas putida cytochrome P-450
1986 • 545 citations
Enhanced sampling in molecular dynamics: use of the time-dependent Hartree approximation for a simulation of carbon monoxide diffusion through myoglobin
1990 • 509 citations
Crystal structures of metyrapone- and phenylimidazole-inhibited complexes of cytochrome P-450cam
1987 • 216 citations
Crystal structures of cytochrome P-450CAM complexed with camphane, thiocamphor, and adamantane: factors controlling P-450 substrate hydroxylation
1991 • 212 citations
Modeling side chains in peptides and proteins: Application of the locally enhanced sampling and the simulated annealing methods to find minimum energy conformations
1991 • 184 citations
Molecular docking using surface complementarity
1996 • 161 citations
Cytochrome P450 cam : crystallography, oxygen activation, and electron transfer 1
1992 • 160 citations
Camphor binding of Pseudomonas putida cytochrome P-450. Kinetics and thermodynamics of the reaction
1972 • 146 citations
Uncoupling Oxygen Transfer and Electron Transfer in the Oxygenation of Camphor Analogues by Cytochrome P450-CAM
1995 • 108 citations
Inhibitor-induced conformational change in cytochrome P-450CAM
1993 • 98 citations
Thermodynamics of water mediating protein-ligand interactions in cytochrome P450cam: a molecular dynamics study
1995 • 95 citations
Computational Alchemy To Calculate Absolute Protein−Ligand Binding Free Energy
1998 • 93 citations
Molecular docking using surface complementarity
1996 • 84 citations
Kinetics of peptide folding: computer simulations of SYPFDV and peptide variants in water 1 1Edited by G. von Heijne
1997 • 70 citations
ARGOS, a vectorized general molecular dynamics program
1990 • 68 citations
Prediction of Regiospecific Hydroxylation of Camphor Analogs by Cytochrome P450cam
1995 • 63 citations
Energy equipartitioning in the classical time-dependent Hartree approximation
1991 • 58 citations
Crystal structure of cytochrome P‐450cam complexed with the (1S)‐camphor enantiomer
1997 • 57 citations
Hydration energy landscape of the active site cavity in cytochrome P450cam.
1998 • 55 citations
Improved Binding of Cytochrome P450cam Substrate Analogues Designed To Fill Extra Space in the Substrate Binding Pocket
1996 • 51 citations
Hydration energy landscape of the active site cavity in cytochrome P450cam
1998 • 51 citations
Deuterium Magic Angle Spinning Studies of Substrates Bound to Cytochrome P450
1999 • 50 citations
Free energies of hydration from thermodynamic integration: Comparison of molecular mechanics force fields and evaluation of calculation accuracy
1997 • 41 citations
Solvation of the active site of cytochrome P450-cam
1990 • 35 citations
Computer determination of peptide conformations in water: different roads to structure.
1995 • 32 citations
Application of the locally enhanced sampling (LES) and a mean field with a binary collision correction (cLES) to the simulation of argon diffusion and nitric oxide recombination in myoglobin
1994 • 28 citations
Structural Changes in Cytochrome P-450camEffected by the Binding of the Enantiomers (1R)-Camphor and (1S)-Camphor
1996 • 25 citations
CASP2 molecular docking predictions with the LIGIN software
1997 • 20 citations
Substrate mobility in thiocamphor-bound cytochrome P450cam: an explanation of the conflict between the observed product profile and the X-ray structure
1993 • 19 citations
The syntheses of 1R- and 1S-5-methylenylcamphor and their epoxidation by cytochrome P-450-CAM
1993 • 18 citations
Theoretical analysis of the multicopy sampling method in molecular modeling
1993 • 18 citations