High-resolution mapping of copy-number alterations with massively parallel sequencing

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

2008 • 7,243 citations

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

2007 • 3,994 citations

Recent Segmental Duplications in the Human Genome

2002 • 1,342 citations

Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome

2007 • 1,150 citations

Mapping and sequencing of structural variation from eight human genomes

2008 • 1,132 citations

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

2008 • 1,081 citations

Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma

2007 • 1,049 citations

A faster circular binary segmentation algorithm for the analysis of array CGH data

2007 • 937 citations

Copy number variation: New insights in genome diversity

2006 • 836 citations

Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing

2008 • 825 citations

Copy-number variation and association studies of human disease

2007 • 623 citations

Array comparative genomic hybridization and its applications in cancer

2005 • 583 citations

Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability

2007 • 430 citations

Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data

2005 • 406 citations

Homozygous Deletions and Chromosome Amplifications in Human Lung Carcinomas Revealed by Single Nucleotide Polymorphism Array Analysis

2005 • 340 citations

Quality scores and SNP detection in sequencing-by-synthesis systems

2008 • 269 citations

Digital karyotyping

2002 • 219 citations

Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution

2007 • 197 citations

NOTCH3 Signaling Pathway Plays Crucial Roles in the Proliferation of ErbB2-Negative Human Breast Cancer Cells

2008 • 176 citations

Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays

2003 • 162 citations

Amplification of a chromatin remodeling gene, Rsf-1/HBXAP, in ovarian carcinoma

2005 • 137 citations

Feedback Circuit among INK4 Tumor Suppressors Constrains Human Glioblastoma Development

2008 • 120 citations

CGH microarrays and cancer

2008 • 118 citations

Homozygous deletion scanning of the lung cancer genome at a 100‐kb resolution

2007 • 61 citations

Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays

2007 • 50 citations

From cytogenetics to next-generation sequencing technologies: advances in the detection of genome rearrangements in tumorsThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.

2008 • 35 citations

Digital karyotyping

2007 • 23 citations