Artificial neural networks for molecular sequence analysis
Data up to Jan 2025
Total Citations Per Year
Abstract
References (155)
Genetic algorithms in search, optimization, and machine learning
1989 • 49,726 citations
Learning representations by back-propagating errors
1986 • 25,825 citations
Neural networks for pattern recognition
1994 • 19,343 citations
Genetic Programming: On the Programming of Computers by Means of Natural Selection
1992 • 13,426 citations
Self-Organization and Associative Memory
1989 • 8,952 citations
A new method for predicting signal sequence cleavage sites
1986 • 4,629 citations
Adaptive Mixtures of Local Experts
1991 • 4,228 citations
A direct adaptive method for faster backpropagation learning: the RPROP algorithm
2002 • 3,779 citations
Self-Organization and Associative Memory
1988 • 3,729 citations
Handwritten Digit Recognition with a Back-Propagation Network
1989 • 3,249 citations
Advances in neural information processing systems 1
1989 • 3,021 citations
Prediction of Protein Secondary Structure at Better than 70% Accuracy
1993 • 2,958 citations
Beyond regression : new fools for prediction and analysis in the behavioral sciences
1974 • 2,830 citations
Optimal Brain Damage
1989 • 2,765 citations
A Practical Bayesian Framework for Backpropagation Networks
1992 • 2,757 citations
Hierarchical Mixtures of Experts and the EM Algorithm
1994 • 2,520 citations
Beyond Regression : "New Tools for Prediction and Analysis in the Behavioral Sciences
1974 • 2,472 citations
The Cascade-Correlation Learning Architecture
1989 • 2,441 citations
Principles of Neurodynamics.
1963 • 2,287 citations
Fundamentals of Artificial Neural Networks
1996 • 1,889 citations
Pruning algorithms-a survey
1993 • 1,691 citations
Database of homology‐derived protein structures and the structural meaning of sequence alignment
1991 • 1,641 citations
Protein Folding
1992 • 1,601 citations
What Size Net Gives Valid Generalization?
1989 • 1,555 citations
Combining evolutionary information and neural networks to predict protein secondary structure
1994 • 1,471 citations
The ART of adaptive pattern recognition by a self-organizing neural network
1988 • 1,300 citations
[31] PHD: Predicting one-dimensional protein structure by profile-based neural networks
1996 • 1,291 citations
Predicting the secondary structure of globular proteins using neural network models
1988 • 1,243 citations
Neural Networks: A Review from a Statistical Perspective
1994 • 1,070 citations
Computer systems that learn: classification and prediction methods from statistics, neural nets, machine learning, and expert systems
1991 • 916 citations
Advances in Neural Information Processing Systems 7
1995 • 879 citations
Selection of representative protein data sets
1992 • 823 citations
Prediction of Protein Structure and the Principles of Protein Conformation
1989 • 814 citations
Fundamentals of Artificial Neural Networks
1996 • 805 citations
Prediction of human mRNA donor and acceptor sites from the DNA sequence
1991 • 798 citations
Fast-learning variations on back propagation: an empirical study.
1989 • 732 citations
Improvements in protein secondary structure prediction by an enhanced neural network
1990 • 708 citations
Counterpropagation networks
1987 • 703 citations
Characterization of translational initiation sites inE. coli
1982 • 673 citations
Neural network architectures: an introduction
1991 • 670 citations
Transmembrane helices predicted at 95% accuracy
1995 • 669 citations
Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach.
1991 • 665 citations
Use of the ‘Perceptron’ algorithm to distinguish translational initiation sites inE. coli
1982 • 660 citations
Conservation and prediction of solvent accessibility in protein families
1994 • 646 citations
Pattern Recognition by Self-Organizing Neural Networks
1991 • 608 citations
Proceedings of the 1988 Connectionist Models Summer School
1989 • 603 citations
Intelligent Engineering Systems through Artificial Neural Networks
2009 • 594 citations
Neural Networks and Related Methods for Classification
1994 • 583 citations
PHD-an automatic mail server for protein secondary structure prediction
1994 • 561 citations
Optimal Brain Surgeon and general network pruning
2002 • 540 citations
Improved prediction of protein secondary structure by use of sequence profiles and neural networks.
1993 • 525 citations
Neural Networks in Computer Intelligence
1994 • 518 citations
Protein secondary structure prediction with a neural network.
1989 • 506 citations
Statistical aspects of neural networks
1993 • 499 citations
A theoretical framework for back-propagation
1988 • 489 citations
Artificial Neural Networks: Approximation and Learning Theory
1992 • 454 citations
Learning Vector Quantization
2001 • 444 citations
Neural Networks in Computer Intelligence
1995 • 417 citations
Improving the convergence of the back-propagation algorithm
1992 • 415 citations
Backpropagation
2013 • 411 citations
Backpropagation: Theory, architectures, and applications
1997 • 396 citations
Models of Neural Networks
1991 • 355 citations
Proceedings: Second international conference on intelligent systems for molecular biology
1994 • 349 citations
Pattern Classification: A Unified View of Statistical and Neural Approaches
1997 • 348 citations
Backpropagation: the basic theory
1995 • 304 citations
Fundamentals of artificial neural networks
1996 • 273 citations
A Novel Approach.
1996 • 259 citations
Prediction of O-glycosylation of mammalian proteins: specificity patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
1995 • 245 citations
Gradient descent learning algorithm overview: a general dynamical systems perspective
1995 • 240 citations
Generalization and Parameter Estimation in Feedforward Nets: Some Experiments
1989 • 232 citations
Identification of Protein Coding Regions In Genomic DNA
1995 • 232 citations
Cleavage site analysis in picornaviral polyproteins: Discovering cellular targets by neural networks
1996 • 227 citations
Bayesian Methods for Backpropagation Networks
1996 • 221 citations
Identification of coding regions in genomic DNA sequences: an application of dynamic programming and neural networks
1993 • 215 citations
Pattern Classification: A Unified View of Statistical and Neural Approaches.
1998 • 184 citations
Learning translation invariant recognition in a massively parallel networks
1987 • 180 citations
Protein secondary structure and homology by neural networks The α‐helices in rhodopsin
1988 • 176 citations
Prediction of protein structure and the principles of protein conformation
1990 • 175 citations
The gene identification problem: An overview for developers
1996 • 149 citations
Models of Neural Networks III
1996 • 148 citations
Hybrid Architectures for Intelligent Systems
1992 • 148 citations
Proceedings of the 1988 connectionist models summer school
1992 • 147 citations
Neural network optimization forE.colipromoter prediction
1991 • 139 citations
[16] Discovering and understanding genes in human DNA sequence using GRAIL
1996 • 136 citations
A novel approach to prediction of the 3‐dimensional structures of protein backbones by neural networks
1990 • 135 citations
Prediction of structural and functional features of protein and nucleic acid sequences by artificial neural networks
1992 • 129 citations
Protein classification artificial neural system
1992 • 123 citations
Neural networks for secondary structure and structural class predictions
1995 • 122 citations
Predicting protein secondary structure using neural net and statistical methods
1992 • 121 citations
Networks and Chaos: Statistical and Probabilistic Aspects
1994 • 120 citations
The Protein Folding Problem and Tertiary Structure Prediction
1994 • 120 citations
Determination of eukaryotic protein coding regions using neural networks and information theory
1992 • 119 citations
Predicting protein secondary structure content
1992 • 106 citations
Neural networks for full-scale protein sequence classification: Sequence encoding with singular value decomposition
1995 • 103 citations
Proceedings of the 1993 Connectionist Models Summer School
2014 • 99 citations
Accelerating backpropagation through dynamic self-adaptation
1996 • 90 citations
Training back-propagation neural networks to define and detect DNA-binding sites
1991 • 87 citations
Learning vector quantization
1988 • 86 citations
[10] Finding protein coding regions in genomic sequences
1990 • 84 citations
An assessment of neural network and statistical approaches for prediction of E.coli Promoter sites
1992 • 83 citations
Proceedings Of The Third International Conference On Intelligent Systems For Molecular Biology
1995 • 75 citations
Application of Neural Networks and Other Machine Learning Algorithms to DNA Sequence Analysis
2018 • 74 citations
Self‐organized neural maps of human protein sequences
1994 • 73 citations
Prediction of protein folding class from amino acid composition
1993 • 73 citations
Optimal Stopping and Effective Machine Complexity in Learning
1993 • 68 citations
Computational Methods in Genome Research
1994 • 66 citations
Using knowledge-based neural networks to improve algorithms: Refining the Chou-Fasman algorithm for protein folding
1993 • 65 citations
Pedagogical pattern selection strategies
1994 • 65 citations
Dynamic node architecture learning: An information theoretic approach
1994 • 61 citations
Identification of a new motif on nucleic acid sequence data using Kohonen's self-organizing map
1991 • 57 citations
Escherichia colipromoters: neural networks develop distinct descriptions in learning to search for promoters of different spacing classes
1992 • 55 citations
Artificial Neural Networks for Pattern Recognition in Biochemical Sequences
1993 • 52 citations
Analysis ofE.colipromoter structures using neural networks
1994 • 52 citations
Neural Network Models for Promoter Recognition
1989 • 51 citations
Cleaning the GenBank Arabidopsis thaliana data set
1996 • 47 citations
A neural network model for the prediction of membrane‐spanning amino acid sequences
1994 • 46 citations
Back-propagation and counter-propagation neural networks for phylogenetic classification of ribosomal RNA sequences
1994 • 44 citations
Optimal stopping and effective machine complexity in learning
2002 • 44 citations
Clustering proteins into families using artificial neural networks
1992 • 43 citations
Improving signal peptide prediction accuracy by simulated neural network
1991 • 42 citations
The protein folding problem and tertiary structure prediction
1995 • 41 citations
Networks and Chaos—Statistical and Probabilistic Aspects
1994 • 41 citations
Artificial neural networks and simulated molecular evolution are potential tools for sequence-oriented protein design
1994 • 41 citations
Analysis of eukaryotic promoter sequences reveals a systematically occurring CT-signal
1995 • 40 citations
Investigations of Escherichia coli promoter sequences with artificial neural networks: new signals discovered upstream of the transcriptional startpoint.
1995 • 39 citations
Peptide design in machina: development of artificial mitochondrial protein precursor cleavage sites by simulated molecular evolution
1995 • 37 citations
Neural Network Model of the Genetic Code is Strongly Correlated to the GES Scale of Amino Acid Transfer Free Energies
1994 • 37 citations
Motif identification neural design for rapid and sensitive protein family search
1996 • 36 citations
Predicting secondary structures of membrane proteins with neural networks
1993 • 34 citations
Proceedings of 1993 IEEE International Conference on Neural Networks (ICNN '93)
1993 • 33 citations
Detection of RNA polymerase II promoters and polyadenylation sites in human DNA sequence
1996 • 33 citations
Neural network analysis of protein tertiary structure
1990 • 31 citations
[5] Gene classification artificial neural system
1996 • 30 citations
LGANN: a parallel system combining a local genetic algorithm and neural networks for the prediction of secondary structure of proteins
1995 • 25 citations
HTP: a neural network-based method for predicting the topology of helical transmembrane domains in proteins
1996 • 23 citations
Application of artificial neural networks for prokaryotic transcription terminator prediction
1994 • 22 citations
Neural network system for the evaluation of side-chain packing in protein structures
1995 • 22 citations
Prediction of protein secondary structures by a neural network
1993 • 20 citations
A hybrid method to cluster protein sequences based on statistics and artificial neural networks
1993 • 20 citations
Application of neural networks and other machine learning algorithms to DNA sequence analysis
1988 • 19 citations
Clustering proteins into families using artificial neural networks
1992 • 18 citations
Classification neural networks for rapid sequence annotation and automated database organization
1993 • 18 citations
Potentially functional regions of nucleic acids recognized by a Kohonen's self-organizing map
1993 • 17 citations
Identification of ribosome binding sites inEscherichia coliusing neural network models
1995 • 15 citations
Untitled
1997 • 13 citations
Protein structure prediction: selecting salient features from large candidate pools.
1993 • 10 citations
Analysis of tRNA Gene Sequences by Neural Network
1995 • 9 citations
A parallel neural network simulator on the connection machine CM-5
1995 • 8 citations
Analysis of transcription control signals using artificial neural networks
1995 • 7 citations
DNA sequence analysis using hierarchical ART-based Classification Networks.
1994 • 7 citations
USE OF THE BACKPROPAGATION NEURAL NETWORK ALGORITHM FOR PREDICTION OF PROTEIN FOLDING PATTERNS
1993 • 6 citations
Applications of Artificial Neural Networks in Genome Research
1994 • 4 citations
Detection of compositional constraints in nucleic acid sequences using neural networks
1995 • 4 citations
USING KNOWLEDGE-BASED NEURAL NETWORKS TO REFINE EXISTING BIOLOGICAL THEORIES
1993 • 4 citations
Comparison of two variations of neural network approach to the prediction of protein folding pattern.
1993 • 3 citations