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Validation and Reproducibility of a Microarray-Based Gene Expression Test for Tumor Identification in Formalin-Fixed, Paraffin-Embedded Specimens

Data up to Jan 2025

Published2011
Citations125
References63

Total Citations Per Year

Abstract

References (63)

STATISTICAL METHODS FOR ASSESSING AGREEMENT BETWEEN TWO METHODS OF CLINICAL MEASUREMENT

1986 • 45,881 citations

A Coefficient of Agreement for Nominal Scales

1960 • 37,524 citations

Akufo and Ibarapa

1965 • 16,925 citations

Cancer: Principles and Practice of Oncology.

1991 • 8,402 citations

The diagnostic odds ratio: a single indicator of test performance

2003 • 2,097 citations

Multiclass cancer diagnosis using tumor gene expression signatures

2001 • 2,021 citations

Cancer—Principles & Practice of Oncology

1983 • 1,403 citations

Effect of Fixatives and Tissue Processing on the Content and Integrity of Nucleic Acids

2002 • 1,235 citations

MicroRNAs accurately identify cancer tissue origin

2008 • 975 citations

Molecular classification of human carcinomas by use of gene expression signatures.

2001 • 681 citations

Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples

1999 • 664 citations

Diagnostic and therapeutic management of cancer of an unknown primary

2003 • 591 citations

Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fixed paraffin-embedded samples

2007 • 561 citations

Measurement of Gene Expression in Archival Paraffin-Embedded Tissues

2004 • 537 citations

Reactions of Nucleic Acids and NucleoDroteins with Formaldehyde

1973 • 325 citations

Analysis of a diagnostic strategy for patients with suspected tumors of unknown origin.

1995 • 319 citations

Molecular classification of multiple tumor types

2001 • 270 citations

Tissue Handling and Specimen Preparation in Surgical Pathology: Issues Concerning the Recovery of Nucleic Acids From Formalin-Fixed, Paraffin-Embedded Tissue

2008 • 264 citations

Molecular Profiling of Carcinoma of Unknown Primary and Correlation With Clinical Evaluation

2008 • 236 citations

Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues

2009 • 232 citations

Multi-Platform, Multi-Site, Microarray-Based Human Tumor Classification

2004 • 228 citations

Panels of Immunohistochemical Markers Help Determine Primary Sites of Metastatic Adenocarcinoma

2007 • 203 citations

Molecular Classification of Human Cancers Using a 92-Gene Real-Time Quantitative Polymerase Chain Reaction Assay

2006 • 197 citations

Multicenter Validation of a 1,550-Gene Expression Profile for Identification of Tumor Tissue of Origin

2009 • 191 citations

Molecular Classification of Human Cancers Using a 92‐Gene Real-Time Quantitative Polymerase Chain Reaction Assay

2006 • 189 citations

RNA expression analysis from formalin fixed paraffin embedded tissues

2008 • 189 citations

Gene Expression Profiling to Identify the Histogenetic Origin of Metastatic Adenocarcinomas of Unknown Primary

2008 • 184 citations

Panels of immunohistochemical markers help determine primary sites of metastatic adenocarcinoma.

2007 • 179 citations

Immunohistochemical Identification of Tumor Markers in Metastatic Adenocarcinoma:A Diagnostic Adjunct in the Determination of Primary Site

1997 • 172 citations

Undifferentiated Tumor: True Identity by Immunohistochemistry

2008 • 170 citations

Cancer of unknown primary (CUP)

2005 • 167 citations

RNA expression analysis of formalin-fixed paraffin-embedded tumors

2007 • 161 citations

Undifferentiated Tumor: True Identity by Immunohistochemistry

2008 • 150 citations

Factors in Tissue Handling and Processing That Impact RNA Obtained From Formalin-fixed, Paraffin-embedded Tissue

2008 • 147 citations

Effect of Duration of Fixation on Quantitative Reverse Transcription Polymerase Chain Reaction Analyses

2002 • 143 citations

Immunohistochemistry as a tool in the differential diagnosis of ovarian tumors: an update.

2005 • 130 citations

Validation of a microRNA-based qRT-PCR test for accurate identification of tumor tissue origin

2010 • 129 citations

Carcinoma of unknown primary with a colon-cancer profile—changing paradigm and emerging definitions

2008 • 126 citations

Accurate Molecular Characterization of Formalin-Fixed, Paraffin-Embedded Tissues by microRNA Expression Profiling

2008 • 118 citations

Identifying tumor origin using a gene expression-based classification map.

2003 • 116 citations

Summary of the Standards, Options and Recommendations for the management of patients with carcinoma of unknown primary site (2002)

2003 • 115 citations

Cancer of Unknown Primary Site

2010 • 113 citations

A Quantitative Reverse Transcriptase-Polymerase Chain Reaction Assay to Identify Metastatic Carcinoma Tissue of Origin

2006 • 104 citations

Gene expression profiling may improve diagnosis in patients with carcinoma of unknown primary

2008 • 101 citations

Tissue Handling for Genome-Wide Expression Analysis: A Review of the Issues, Evidence, and Opportunities

2007 • 98 citations

Interlaboratory Performance of a Microarray-Based Gene Expression Test to Determine Tissue of Origin in Poorly Differentiated and Undifferentiated Cancers

2007 • 97 citations

Determining Tissue of Origin for Metastatic Cancers

2009 • 93 citations

Formaldehyde as a probe of DNA structure. 3. Equilibrium denaturation of DNA and synthetic polynucleotides

1977 • 93 citations

Treatment for Patients With Unknown Primary Carcinoma and Unfavorable Prognostic Factors

2009 • 88 citations

Quantitative expression profiling of highly degraded RNA from formalin-fixed, paraffin-embedded breast tumor biopsies by oligonucleotide microarrays

2008 • 82 citations

Diagnosis of Metastatic Neoplasms: Molecular Approaches for Identification of Tissue of Origin

2010 • 82 citations

The duration of fixation influences the yield of HCV cDNA-PCR products from formalin-fixed, paraffin-embedded liver tissue

1994 • 79 citations

Diagnosis of metastatic neoplasms: molecular approaches for identification of tissue of origin.

2010 • 73 citations

Identification of tissue of origin in carcinoma of unknown primary with a microarray-based gene expression test

2010 • 67 citations

The role of immunohistochemistry in the diagnosis of urinary bladder neoplasms

2005 • 67 citations

Impact of Fixative on Recovery of mRNA From Paraffin-Embedded Tissue

2004 • 64 citations

Microarray analysis of RNA extracted from formalin-fixed, paraffin-embedded and matched fresh-frozen ovarian adenocarcinomas

2009 • 58 citations

Immunohistochemical Expression of Estrogen and Progesterone Receptors in Primary Pulmonary Neuroendocrine Tumors

2008 • 54 citations

Implementation of a novel microarray‐based diagnostic test for cancer of unknown primary

2009 • 54 citations

Immunohistochemical Expression of Estrogen and Progesterone Receptors in Primary Pulmonary Neuroendocrine Tumors

2008 • 52 citations

Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays

2007 • 49 citations

A novel approach for reliable microarray analysis of microdissected tumor cells from formalin-fixed and paraffin-embedded colorectal cancer resection specimens

2008 • 39 citations

Genome‐wide expression analysis of recently processed formalin‐fixed paraffin embedded human prostate tissues

2008 • 21 citations

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Validation and Reproducibility of a Microarray-Based Gene Expression Test for Tumor… (2011) – Journal of Molecular Diagnostics | Metascience Observatory Explorer