Immune epitope database analysis resource (IEDB-AR)

The Protein Data Bank

2000 • 35,287 citations

Measuring the Accuracy of Diagnostic Systems

1988 • 9,129 citations

Improved method for predicting linear B-cell epitopes.

2006 • 1,143 citations

Reliable prediction of T‐cell epitopes using neural networks with novel sequence representations

2003 • 1,064 citations

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction

2007 • 833 citations

Generation of tissue-specific and promiscuous HLA ligand databases using DNA microarrays and virtual HLA class II matrices

1999 • 747 citations

Prediction of residues in discontinuous B‐cell epitopes using protein 3D structures

2006 • 596 citations

Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method

2007 • 563 citations

Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method

2005 • 502 citations

Development of an epitope conservancy analysis tool to facilitate the design of epitope-based diagnostics and vaccines

2007 • 455 citations

The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage

2005 • 448 citations

MHC class II proteins and disease: a structural perspective

2006 • 407 citations

The Immune Epitope Database and Analysis Resource: From Vision to Blueprint

2005 • 380 citations

Modeling the MHC class I pathway by combining predictions of proteasomal cleavage,TAP transport and MHC class I binding

2005 • 340 citations

Benchmarking B cell epitope prediction: Underperformance of existing methods

2004 • 311 citations

An integrative approach to CTL epitope prediction: A combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions

2005 • 310 citations

A Community Resource Benchmarking Predictions of Peptide Binding to MHC-I Molecules

2006 • 284 citations

Automated generation and evaluation of specific MHC binding predictive tools: ARB matrix applications

2005 • 259 citations

Evaluation of MHC class I peptide binding prediction servers: Applications for vaccine research

2008 • 239 citations

Towards a consensus on datasets and evaluation metrics for developing B‐cell epitope prediction tools

2007 • 237 citations

Structure of AMA1 from Plasmodium falciparum reveals a clustering of polymorphisms that surround a conserved hydrophobic pocket

2005 • 192 citations

Examining the independent binding assumption for binding of peptide epitopes to MHC-I molecules

2003 • 128 citations

The ORION statement: guidelines for transparent reporting of Outbreak Reports and Intervention studies Of Nosocomial infection

2007 • 124 citations

In Silico Tools for Predicting Peptides Binding to HLA-Class II Molecules: More Confusion than Conclusion

2007 • 90 citations

EpitopeViewer: a Java application for the visualization and analysis of immune epitopes in the Immune Epitope Database and Analysis Resource (IEDB).

2007 • 48 citations

The major horse allergen Equ c 1 contains one immunodominant region of T cell epitopes

2007 • 29 citations

Impact of hepatitis B virus basic core promoter mutations on T cell response to an immunodominant HBx-derived epitope

2007 • 26 citations

Determination of a HLA II Promiscuous Peptide Cocktail as Potential Vaccine Against EBV Latency II Malignancies

2007 • 26 citations