Using reliability information to annotate RNA secondary structures

Fast folding and comparison of RNA secondary structures

1994 • 2,262 citations

On Finding All Suboptimal Foldings of an RNA Molecule

1989 • 2,019 citations

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

1990 • 1,321 citations

Improved predictions of secondary structures for RNA.

1989 • 822 citations

STRUCTURE OF RIBOSOMAL RNA

1984 • 793 citations

Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994

1994 • 533 citations

Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding.

1994 • 474 citations

The ribonuclease P database

1998 • 429 citations

[17] Predicting optimal and suboptimal secondary structure for RNA

1990 • 383 citations

Prediction of RNA Secondary Structure by Energy Minimization

1994 • 201 citations

Nucleotide sequence of the gene encoding the RNA subunit (M1 RNA) of ribonuclease P from Escherichia coli

1982 • 150 citations

A comparison of thermodynamic foldings with comparatively derived structures of 16S and 16S-like rRNAs.

1995 • 129 citations

Assessing the reliability of RNA folding using statistical mechanics

1997 • 118 citations

‘Well-determined’ regions in RNA secondary structure prediction: analysis of small subunit ribosomal RNA

1995 • 103 citations

A dynamic programming algorithm for finding alternative RNA secondary structure

1986 • 80 citations

Structural Analysis by Energy Dot Plot of a Large mRNA

1993 • 74 citations

Topological Organization of Picornaviral Genomes: Statistical Prediction of RNA Structural Signals

1997 • 74 citations

Characterization of the RNase P RNA of Sulfolobus acidocaldarius

1993 • 41 citations

Nucleotide sequence ofThermus thermophilusHB8 gene coding 16S rRNA

1988 • 37 citations

Structural plasticity in RNA and its role in the regulation of protein translation in coliphage Qβ 1 1Edited by J. Karn

1998 • 18 citations