The Long-Term Stability of the Human Gut Microbiota

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2009 • 20,860 citations

Search and clustering orders of magnitude faster than BLAST

2010 • 19,342 citations

Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

2007 • 17,871 citations

FLASH: fast length adjustment of short reads to improve genome assemblies

2011 • 12,483 citations

Structure, function and diversity of the healthy human microbiome

2012 • 10,447 citations

A human gut microbial gene catalogue established by metagenomic sequencing

2010 • 10,392 citations

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

2012 • 7,840 citations

Diversity of the Human Intestinal Microbial Flora

2005 • 7,395 citations

A core gut microbiome in obese and lean twins

2008 • 7,389 citations

Versatile and open software for comparing large genomes.

2004 • 5,126 citations

Phylogenetic structure of the prokaryotic domain: The primary kingdoms

1977 • 3,836 citations

Bacterial Community Variation in Human Body Habitats Across Space and Time

2009 • 3,002 citations

Changes in Energy Expenditure Resulting from Altered Body Weight

1995 • 1,926 citations

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

2011 • 1,820 citations

Temperature Gradient Gel Electrophoresis Analysis of 16S rRNA from Human Fecal Samples Reveals Stable and Host-Specific Communities of Active Bacteria

1998 • 1,347 citations

Moving pictures of the human microbiome

2011 • 1,102 citations

Counting absolute numbers of molecules using unique molecular identifiers

2011 • 978 citations

Genomic variation landscape of the human gut microbiome

2012 • 852 citations

IgA Response to Symbiotic Bacteria as a Mediator of Gut Homeostasis

2007 • 773 citations

Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice

2011 • 712 citations

Identifying Genetic Determinants Needed to Establish a Human Gut Symbiont in Its Habitat

2009 • 681 citations

Short pyrosequencing reads suffice for accurate microbial community analysis

2007 • 670 citations

The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins

2011 • 524 citations

Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins

2010 • 456 citations

Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID

2011 • 382 citations

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

2005 • 357 citations

PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers

2011 • 352 citations

Intestinal Flora and Aging

2009 • 298 citations

Effects of Weight Change on Plasma Leptin Concentrations and Energy Expenditure¹

1997 • 267 citations

Long‐term monitoring of the human intestinal microbiota composition

2012 • 258 citations

Do College Students Drink More Than Their Non-College-Attending Peers? Evidence From a Population-Based Longitudinal Female Twin Study.

2004 • 234 citations

Whole-genome prokaryotic phylogeny

2004 • 233 citations

Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii , studied in twins

2011 • 224 citations

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

2009 • 221 citations

Effects of Weight Change on Plasma Leptin Concentrations and Energy Expenditure

1997 • 175 citations

Parallel, tag-directed assembly of locally derived short sequence reads

2010 • 157 citations

Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts

2012 • 137 citations

Leptin reverses declines in satiation in weight-reduced obese humans

2012 • 110 citations

Genetics in twins with Crohnʼs disease: Less pronounced than previously believed?

2010 • 99 citations

A comparative study of different means of assessing long-term energy expenditure in humans

1996 • 73 citations

Alcoholism and Timing of Separation in Parents: Findings in a Midwestern Birth Cohort

2013 • 44 citations