The Ensembl Analysis Pipeline

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

2002 • 18,672 citations

Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen

2001 • 11,901 citations

tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence

1997 • 9,993 citations

The Human Genome Browser at UCSC

2002 • 9,920 citations

Tandem repeats finder: a program to analyze DNA sequences

1999 • 7,679 citations

tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence

1997 • 3,632 citations

The InterPro Database, 2003 brings increased coverage and new features

2003 • 698 citations

A Neural Network Method for Identification of Prokaryotic and Eukaryotic Signal Peptides and Prediction of their Cleavage Sites

1997 • 686 citations

The Ensembl Automatic Gene Annotation System

2004 • 415 citations

Sequence Mapping by Electronic PCR

1997 • 369 citations

Computational Detection and Location of Transcription Start Sites in Mammalian Genomic DNA

2002 • 293 citations

ASAP, a systematic annotation package for community analysis of genomes

2003 • 166 citations

The Ensembl Core Software Libraries: Figure 1

2004 • 132 citations

Biopipe: A Flexible Framework for Protocol-Based Bioinformatics Analysis

2003 • 86 citations

A global compositional complexity measure for biological sequences: AT-rich and GC-rich genomes encode less complex proteins

2000 • 62 citations

An integrated computational pipeline and database to support whole-genome sequence annotation

2002 • 53 citations

A global compositional complexity measure for biological sequences: AT-rich and GC-rich genomes encode less complex proteins

2000 • 28 citations

The Ensembl Computing Architecture

2004 • 28 citations

Genescript: DNA sequence annotation pipeline

2003 • 12 citations