SAGA: a subgraph matching tool for biological graphs

Introduction to Modern Information Retrieval

1983 • 9,967 citations

Introduction to modern information retrieval

1983 • 5,841 citations

Functional organization of the yeast proteome by systematic analysis of protein complexes

2002 • 4,751 citations

A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae

2000 • 4,734 citations

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

2002 • 3,624 citations

A comprehensive two-hybrid analysis to explore the yeast protein interactome

2001 • 3,564 citations

A Genomic Perspective on Protein Families

1997 • 3,531 citations

Approximation Algorithms for NP-Hard Problems

1997 • 3,081 citations

From genomics to chemical genomics: new developments in KEGG

2005 • 3,004 citations

Algorithm 457: finding all cliques of an undirected graph

1973 • 2,329 citations

Reactome: a knowledgebase of biological pathways

2004 • 1,258 citations

The Biochemistry of Affective Disorders

1967 • 1,183 citations

Conserved patterns of protein interaction in multiple species

2005 • 798 citations

A Combined Experimental and Computational Strategy to Define Protein Interaction Networks for Peptide Recognition Modules

2002 • 711 citations

Graph indexing

2004 • 644 citations

PathBLAST: a tool for alignment of protein interaction networks

2004 • 427 citations

Algorithmics and applications of tree and graph searching

2002 • 386 citations

Wnts and Hedgehogs: lipid-modified proteins and similarities in signaling mechanisms at the cell surface

2003 • 339 citations

Substructure similarity search in graph databases

2005 • 324 citations

Closure-Tree: An Index Structure for Graph Queries

2006 • 299 citations

Functional modules by relating protein interaction networks and gene expression

2003 • 194 citations

Similarities between the Hedgehog and Wnt signaling pathways

2002 • 141 citations

CDK Inhibitor p18INK4c Is Required for the Generation of Functional Plasma Cells

2002 • 106 citations

Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution

2005 • 75 citations

Searching Substructures with Superimposed Distance

2006 • 44 citations

p18(INK4c) collaborates with other CDK-inhibitory proteins in the regenerating liver

2003 • 35 citations

A high-throughput assay for Tn5 Tnp-induced DNA cleavage

2004 • 34 citations

PathAligner

2004 • 29 citations