Semantic role labeling for protein transport predicates

Database resources of the National Center for Biotechnology Information: update

2003 • 10,877 citations

The Proposition Bank: An Annotated Corpus of Semantic Roles

2005 • 2,334 citations

Computational linguistics

1995 • 1,723 citations

A Maximum Entropy Model for Part-Of-Speech Tagging

1996 • 1,314 citations

Textpresso: An Ontology-Based Information Retrieval and Extraction System for Biological Literature

2004 • 667 citations

Introduction to the CoNLL-2005 shared task

2005 • 665 citations

Literature mining for the biologist: from information retrieval to biological discovery

2006 • 632 citations

The Biomolecular Interaction Network Database and related tools 2005 update

2004 • 604 citations

From treebank to propbank

2002 • 555 citations

Chunking with support vector machines

2001 • 542 citations

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

2005 • 474 citations

Introduction to the CoNLL-2004 Shared Task: Semantic Role Labeling

2004 • 403 citations

Using predicate-argument structures for information extraction

2003 • 373 citations

Text Mining for Biology And Biomedicine

2005 • 371 citations

Database resources of the National Center for Biotechnology Information

2005 • 358 citations

Calibrating Features for Semantic Role Labeling

2004 • 326 citations

Support Vector Learning for Semantic Argument Classification

2005 • 281 citations

MedPost: a part-of-speech tagger for bioMedical text

2004 • 227 citations

The 2017 Conference on Empirical Methods on Natural Language Processing (EMNLP)

2015 • 218 citations

Joint learning improves semantic role labeling

2005 • 183 citations

Knowtator

2006 • 162 citations

OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression

2008 • 156 citations

Joint Determination of Anaphoricity and Coreference Resolution using Integer Programming

2007 • 155 citations

The Light Verb Jungle

2003 • 150 citations

Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors

2004 • 148 citations

Gene indexing: characterization and analysis of NLM's GeneRIFs.

2003 • 142 citations

Generalized inference with multiple semantic role labeling systems

2005 • 131 citations

Parsing Biomedical Literature

2005 • 126 citations

Towards Robust Semantic Role Labeling

2008 • 120 citations

Elements of a National SemanticWeb Infrastructure--Case Study Finland on the Semantic Web

2007 • 120 citations

The Disambiguation of Nominalizations

2002 • 117 citations

Building a Large Lexical Databank Which Provides Deep Semantics

2001 • 116 citations

Annotating Noun Argument Structure for NomBank

2004 • 105 citations

TREC Genomics Track Overview

2003 • 101 citations

Benchmarking natural-language parsers for biological applications using dependency graphs

2007 • 98 citations

Semantic Role Labeling by Tagging Syntactic Chunks

2004 • 96 citations

Semantic role chunking combining complementary syntactic views

2005 • 78 citations

MILANO – custom annotation of microarray results using automatic literature searches

2005 • 72 citations

The (Non)Utility of Predicate-Argument Frequencies for Pronoun Interpretation.

2004 • 67 citations

BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features

2007 • 59 citations

Improving protein function prediction methods with integrated literature data

2008 • 57 citations

Shallow semantics for relation extraction

2005 • 56 citations

Extraction of Transcript Diversity from Scientific Literature

2005 • 52 citations

Target word detection and semantic role chunking using support vector machines

2003 • 52 citations

A semi-automatic method for annotating a biomedical proposition bank

2006 • 48 citations

Semantic Role Labeling of NomBank

2006 • 48 citations

Towards semantic role labeling & IE in the medical literature.

2005 • 46 citations

Introduction To The Colloquy

2003 • 45 citations

Unrestricted Coreference: Identifying Entities and Events in OntoNotes

2007 • 37 citations

Parsing arguments of nominalizations in English and Chinese

2004 • 31 citations

Support vector machines applied to the classification of semantic relations in nominalized noun phrases

2004 • 21 citations

BIOSMILE: adapting semantic role labeling for biomedical verbs

2006 • 21 citations

BioText Team Report for the TREC 2003 Genomics Track.

2003 • 19 citations

A lightweight semantic chunking model based on tagging

2004 • 18 citations

Searching for geneRIFs: Concept-Based Query Expansion and Bayes Classification.

2003 • 14 citations

BioText Team Report for the TREC 2006 Genomics Track.

2006 • 12 citations