Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays

Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection

2000 • 3,126 citations

High density synthetic oligonucleotide arrays

1999 • 2,256 citations

Genomics, gene expression and DNA arrays

2000 • 2,039 citations

Accessing Genetic Information with High-Density DNA Arrays

1996 • 1,511 citations

Thermodynamic Parameters To Predict Stability of RNA/DNA Hybrid Duplexes

1995 • 672 citations

Thermodynamic basis of the enhanced specificity of structured DNA probes

1999 • 652 citations

Sequence Dependent Rigidity of Single Stranded DNA

2000 • 288 citations

Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays

2003 • 162 citations

The contribution of DNA single-stranded order to the thermodynamics of duplex formation.

1991 • 155 citations

Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays

2002 • 133 citations

Discrete model for DNA-promoter dynamics

1991 • 122 citations

DNA hybridization to mismatched templates: A chip study

2002 • 122 citations

Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays

2002 • 89 citations

Functional genomics as applied to mapping transcription regulatory networks

2002 • 79 citations

Blazing Pathways Through Genetic Mountains

2001 • 25 citations

Effect of defects on thermal denaturation of DNA oligomers

2001 • 24 citations

Influence of defects on the electrophoretic, thermodynamic and dielectric properties of a 21 base pair DNA in solution

1993 • 20 citations

Dynamic model of base pair breathing in a DNA chain with a defect

2001 • 19 citations